Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
KCMF1Q9P0J7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.47□□□□□ -1.69
KCMF1Q9P0J7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCMF1Q9P0J7 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
KCMF1Q9P0J7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
KCMF1Q9P0J7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
KCMF1Q9P0J7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
KCMF1Q9P0J7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
KCMF1Q9P0J7 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC012618.3-205ENST00000637896 1496 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 MTND4P35-201ENST00000604257 1375 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNU4-79P-201ENST00000362764 141 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 Y_RNA.58-201ENST00000362807 102 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 Y_RNA.154-201ENST00000363624 102 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNY3P1-201ENST00000365085 102 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNY3-201ENST00000365484 102 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 Y_RNA.460-201ENST00000384255 102 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 Y_RNA.490-201ENST00000384413 102 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 snosnR66.1-201ENST00000391095 99 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNU6-510P-201ENST00000391239 108 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AL136372.1-201ENST00000403060 228 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AL592291.1-201ENST00000403830 352 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AP000580.1-201ENST00000404439 358 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RN7SKP159-201ENST00000410657 292 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC018630.2-202ENST00000422992 927 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC005517.2-201ENST00000424673 553 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 HMGB3P9-201ENST00000441799 583 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC016696.1-201ENST00000446949 318 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC010655.1-201ENST00000449336 292 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC079168.2-201ENST00000453977 416 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNU7-182P-201ENST00000459009 62 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 HMGN2P26-201ENST00000463169 339 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 HMGB1P25-201ENST00000468402 607 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RPS29P22-201ENST00000472363 168 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 HMGN1P13-201ENST00000505795 138 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC002456.2-201ENST00000509356 380 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNA5SP360-201ENST00000516555 118 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RN7SKP219-201ENST00000516825 296 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RNU6-1314P-201ENST00000517139 104 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 NARSP2-201ENST00000518524 679 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC087241.2-201ENST00000535801 324 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 HPRT1P3-201ENST00000539521 576 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC105129.1-201ENST00000560250 297 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC005668.1-201ENST00000571142 476 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AL669831.4-202ENST00000590817 238 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 uc_338.5-201ENST00000611839 155 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 MIR8069-1-201ENST00000616627 86 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 MIR6853-201ENST00000619642 74 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 MIR8069-2-201ENST00000621412 86 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 TPTEP1-208ENST00000636884 213 ntBASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
KCMF1Q9P0J7 AC244517.1-201ENST00000606030 2086 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC004972.1-201ENST00000623934 2209 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC000123.3-201ENST00000624029 4975 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 Y_RNA.231-201ENST00000364358 102 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 RNU4-20P-201ENST00000365601 151 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 RNA5SP56-201ENST00000410277 118 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 RNU4-78P-201ENST00000410940 126 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 RNU6-193P-201ENST00000410977 107 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AL591848.1-201ENST00000413092 322 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 RPL26P29-201ENST00000415623 438 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 RPL35AP22-201ENST00000436855 335 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 TDGF1P1-201ENST00000445734 527 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 MTND1P18-201ENST00000448191 573 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC007537.2-201ENST00000472093 511 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC008897.1-201ENST00000494006 347 ntBASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.45□□□□□ -1.7
KCMF1Q9P0J7 AC092436.1-201ENST00000506450 503 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms