Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 TRBV26-201ENST00000456572 344 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 RPS4XP2-201ENST00000458402 793 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AP000797.1-201ENST00000478870 387 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC011825.1-201ENST00000484967 388 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 ARL2BPP4-201ENST00000506854 471 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC116347.2-201ENST00000514912 523 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 RN7SKP60-201ENST00000516985 239 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AP002748.2-201ENST00000528671 348 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 TGIF1P1-201ENST00000558095 802 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC083760.1-201ENST00000589621 670 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC022916.3-201ENST00000592961 742 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC007687.1-201ENST00000602704 304 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AP000403.1-201ENST00000603349 851 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AC024941.1-201ENST00000612250 334 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 Z99129.1-201ENST00000612510 255 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 AL357080.1-201ENST00000617394 239 ntBASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.76□□□□□ -1.81
SMARCAL1Q9NZC9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 Y_RNA.3-201ENST00000362331 103 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 U8.14-201ENST00000390843 143 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 HMGB1P17-201ENST00000403495 628 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 MIR320C1-201ENST00000408566 88 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 RPL17P12-201ENST00000413391 526 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 RPS3AP44-201ENST00000425466 790 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AL031667.1-201ENST00000440222 725 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 MTND5P14-201ENST00000441481 1267 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC239367.2-201ENST00000447309 705 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 PPIAP3-201ENST00000450588 505 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 SSXP1-201ENST00000453640 473 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 CEACAMP4-201ENST00000457676 421 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC010401.1-201ENST00000463867 348 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 TMED11P-201ENST00000479478 690 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC093809.1-201ENST00000509155 340 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AL117351.2-201ENST00000513571 157 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC104057.1-201ENST00000515547 497 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-720P-201ENST00000516363 108 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AP004247.1-201ENST00000531556 1289 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC026333.2-201ENST00000542164 106 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC074029.1-201ENST00000552531 1044 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 MIR544B-201ENST00000582372 78 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 RNU1-30P-201ENST00000606575 163 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC005344.1-201ENST00000613391 459 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC025588.4-201ENST00000615802 908 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC015540.1-201ENST00000615828 501 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AL732618.1-201ENST00000623251 301 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 ELL2P4-201ENST00000446870 1376 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 AC026951.1-201ENST00000559530 2459 ntBASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
SMARCAL1Q9NZC9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC130650.2-201ENST00000618736 2403 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AP004289.2-201ENST00000444413 1457 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 TEX21P-201ENST00000447107 1476 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 Y_RNA.41-201ENST00000362646 102 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 SNORD6-201ENST00000365444 73 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-348P-201ENST00000384386 107 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 MIR153-1-201ENST00000384914 90 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-55P-201ENST00000411092 107 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 RNU6-954P-201ENST00000411355 107 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AC004987.3-201ENST00000413879 771 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 TPMTP2-201ENST00000414372 726 ntBASIC3.74□□□□□ -1.81
SMARCAL1Q9NZC9 DBIP2-201ENST00000419076 262 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms