Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 SRP72P2-201ENST00000344851 1979 ntBASIC9.72□□□□□ -0.85
SCAF1Q9H7N4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
SCAF1Q9H7N4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SCAF1Q9H7N4 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 RNA5SP197-201ENST00000363357 119 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 RNU6-103P-201ENST00000363686 107 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 RNU6-640P-201ENST00000363693 105 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 Y_RNA.534-201ENST00000384599 112 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 MIR548A3-201ENST00000385297 97 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 Y_RNA.595-201ENST00000410403 105 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 RN7SKP286-201ENST00000410894 299 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AP006222.1-205ENST00000450734 457 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 RPL23AP45-201ENST00000476406 468 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AC021269.2-201ENST00000532318 330 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 MIR6844-201ENST00000637122 62 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 AC009951.1-201ENST00000623674 2614 ntBASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
SCAF1Q9H7N4 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 AC007529.1-201ENST00000418574 2178 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 RNVU1-3-201ENST00000364313 161 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 RNU6-407P-201ENST00000365280 104 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 RNU6-395P-201ENST00000365662 106 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 MAP1LC3BP1-201ENST00000417653 379 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 AC068228.1-201ENST00000461723 211 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 RN7SL797P-201ENST00000486314 297 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 RPS15AP34-201ENST00000487776 387 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 RN7SKP258-201ENST00000517151 304 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 AC109810.1-201ENST00000534066 224 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 TRAV37-201ENST00000553906 342 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 U1.34-201ENST00000618578 162 ntBASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SCAF1Q9H7N4 AC134026.1-201ENST00000623249 2239 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AP002800.1-201ENST00000624982 2225 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AL355834.1-201ENST00000556602 3965 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AC024587.1-201ENST00000505925 2157 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AC099654.2-201ENST00000433031 1980 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RACGAP1P-201ENST00000550663 1879 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 Y_RNA.348-201ENST00000365403 103 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RNU1-139P-201ENST00000391307 165 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RNU6-588P-201ENST00000410281 105 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 Y_RNA.630-201ENST00000411370 108 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 PPIAP7-201ENST00000454070 489 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 HLA-DPA3-207ENST00000454398 229 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RPS26P39-201ENST00000469206 341 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RN7SL165P-201ENST00000477476 291 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RPS14P8-201ENST00000478778 369 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 RNU6-1114P-201ENST00000516022 107 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 AC090617.7-201ENST00000623952 126 ntBASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC9.69□□□□□ -0.86
SCAF1Q9H7N4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 RNA5SP242-201ENST00000364171 118 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 AL353748.1-201ENST00000440753 474 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 Y_RNA.637-201ENST00000459424 114 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 IGKV2-19-201ENST00000518132 283 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 CR383656.7-201ENST00000548164 174 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 AC022441.3-201ENST00000605737 136 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 AC211433.2-201ENST00000608433 387 ntBASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
SCAF1Q9H7N4 ZNF702P-202ENST00000434269 1966 ntBASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms