Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CYCSP45-201ENST00000402289 315 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AL513475.1-201ENST00000406602 315 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AL513331.1-201ENST00000411908 397 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 TMEM167AP1-201ENST00000423409 219 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 MTCO1P39-201ENST00000426148 480 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC234781.2-201ENST00000426370 994 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AL139132.1-201ENST00000431587 344 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC097499.1-201ENST00000444277 208 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC004022.1-201ENST00000447766 1066 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC233982.1-201ENST00000451247 436 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC010099.1-201ENST00000455434 375 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC108734.3-201ENST00000481241 1165 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AP001804.3-201ENST00000525146 880 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AP000889.2-201ENST00000532684 490 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 CKS1BP1-201ENST00000555221 240 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 RPS3AP23-202ENST00000574601 686 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 RPS15AP11-201ENST00000594193 385 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AP001330.4-201ENST00000604350 154 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC106900.2-201ENST00000604994 317 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC242628.1-201ENST00000606810 391 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AL513477.2-201ENST00000607858 568 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC106028.5-201ENST00000610332 395 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 ATP5A1P2-202ENST00000616464 443 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 U4.3-201ENST00000621047 82 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC068620.4-201ENST00000636730 1182 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 AC119674.1-220ENST00000641502 1048 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 ZNF658B-202ENST00000615961 3375 ntBASIC1.54□□□□□ -2.16
LIMD2Q9BT23 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.54□□□□□ -2.16
LIMD2Q9BT23 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RNU6-819P-201ENST00000364116 107 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RNA5SP37-201ENST00000365420 130 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 MIR491-201ENST00000384877 84 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RNU6-712P-201ENST00000410558 100 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RNU2-40P-201ENST00000410833 196 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC008280.1-201ENST00000418851 412 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC105272.1-201ENST00000438604 198 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC009296.1-201ENST00000443146 155 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC068135.1-201ENST00000446164 246 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC233279.1-201ENST00000455300 423 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AL139109.1-201ENST00000455491 297 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RPL23AP45-201ENST00000476406 468 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 RPS3AP14-201ENST00000483907 780 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 FAM172BP-201ENST00000487497 1089 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC104997.1-201ENST00000519761 717 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 HMGB1P46-201ENST00000520062 610 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 OR5AK3P-201ENST00000527486 1297 ntBASIC1.53□□□□□ -2.16
LIMD2Q9BT23 AC007954.1-201ENST00000554198 494 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms