Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC110768.1-201ENST00000509222 400 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF4Q92544 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 BRDTP1-201ENST00000605735 677 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC068276.1-201ENST00000605793 379 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC087752.4-201ENST00000605911 462 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC100793.4-201ENST00000613683 429 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 AC068722.2-201ENST00000618734 544 ntBASIC3.53□□□□□ -1.84
TM9SF4Q92544 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF4Q92544 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TM9SF4Q92544 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TM9SF4Q92544 AL022578.1-201ENST00000439330 1433 ntBASIC3.53□□□□□ -1.85
TM9SF4Q92544 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 ELL2P4-201ENST00000446870 1376 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC130650.2-201ENST00000618736 2403 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 MTND5P28-201ENST00000438005 1594 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 FGF7P2-201ENST00000332473 296 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 RNU6-289P-201ENST00000364093 107 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 RNU6-952P-201ENST00000391164 108 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 HMGB1P17-201ENST00000403495 628 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC109780.2-201ENST00000413467 845 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC004987.3-201ENST00000413879 771 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 HMGB1P11-201ENST00000413899 637 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 RPS7P15-201ENST00000415804 584 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 SKP1P1-201ENST00000438081 489 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 LSM1P1-201ENST00000438629 273 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC083863.1-201ENST00000438811 231 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AL031667.1-201ENST00000440222 725 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 MTCO1P27-201ENST00000448269 226 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 RPS3AP46-201ENST00000448352 682 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 TRBV26-201ENST00000456572 344 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 RPL9P32-201ENST00000464118 620 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 RPL32P34-201ENST00000486380 400 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC114981.1-201ENST00000503897 678 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 RNU6-352P-201ENST00000516908 107 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC013828.2-201ENST00000532487 235 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 HSPE1P3-201ENST00000559254 309 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC091489.2-201ENST00000566263 604 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AP000403.1-201ENST00000603349 851 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC007179.3-201ENST00000604976 235 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC025588.4-201ENST00000615802 908 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC068792.1-201ENST00000621354 417 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC138649.5-201ENST00000637456 137 ntBASIC3.52□□□□□ -1.85
TM9SF4Q92544 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
TM9SF4Q92544 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TM9SF4Q92544 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 TNPO1P3-201ENST00000436471 2662 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 MTCO1P12-201ENST00000414273 1543 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.51□□□□□ -1.85
TM9SF4Q92544 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TM9SF4Q92544 MIR153-1-201ENST00000384914 90 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 RNU6-192P-201ENST00000391253 100 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 HLFP1-201ENST00000402375 499 ntBASIC3.51□□□□□ -1.85
TM9SF4Q92544 HSPE1P8-201ENST00000406997 288 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 198.7 ms