Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 MIR5680-201ENST00000577577 84 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 AC006557.5-201ENST00000603126 811 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 AC025946.2-201ENST00000603398 234 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 AC105129.3-201ENST00000605455 485 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 Z83843.1-201ENST00000604070 3685 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 DDX43P2-201ENST00000604753 1354 ntBASIC2.71□□□□□ -1.98
LINC01006Q8NI28 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.71□□□□□ -1.98
LINC01006Q8NI28 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 XIAPP3-201ENST00000312918 795 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RNVU1-3-201ENST00000364313 161 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 MT-TH-201ENST00000387441 69 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 U3.29-201ENST00000391296 212 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 SNORA26.8-201ENST00000391306 124 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RPL7P8-201ENST00000411964 730 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RPL23AP39-201ENST00000415533 405 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 PSMA6P3-201ENST00000428242 164 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 FTH1P6-201ENST00000430768 320 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 UBE2FP3-201ENST00000436366 524 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LSM1P1-201ENST00000438629 273 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 KATNBL1P6-201ENST00000453433 915 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RPL31P50-201ENST00000471002 296 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AL024509.2-201ENST00000493462 493 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RPL7P23-201ENST00000493874 747 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 OR2A20P-203ENST00000498397 1268 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 PHBP14-201ENST00000512887 367 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 MIR2114-201ENST00000516645 80 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC060788.1-201ENST00000521318 469 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC024224.1-201ENST00000538284 609 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC090616.5-202ENST00000582111 297 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 MIR4276-201ENST00000584832 70 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 KLKP1-201ENST00000595979 403 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AP001981.2-201ENST00000603241 418 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 MTCYBP22-201ENST00000603788 447 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC107214.2-201ENST00000608204 634 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC103710.4-201ENST00000609301 899 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC106028.5-201ENST00000610332 395 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC073968.1-201ENST00000618594 637 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC008443.7-201ENST00000622195 246 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 AC093908.1-201ENST00000623125 8092 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 NUP58P1-201ENST00000502546 1738 ntBASIC2.7□□□□□ -1.98
LINC01006Q8NI28 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LINC01006Q8NI28 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LINC01006Q8NI28 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms