Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC104623.2-202ENST00000623477 4002 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 Y_RNA.422-201ENST00000384054 114 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 MIR548F5-201ENST00000408421 86 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 VN1R36P-201ENST00000414936 291 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC104333.2-201ENST00000422630 192 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 GAPDHP58-201ENST00000438477 1006 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 RPL23AP33-201ENST00000442301 452 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AL162388.1-201ENST00000450912 352 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC072052.1-201ENST00000496556 306 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC098591.2-201ENST00000510152 315 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 Y_RNA.718-201ENST00000517110 102 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC106782.4-201ENST00000568264 210 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 MIR3171-201ENST00000584270 74 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC069307.1-201ENST00000602820 447 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 SUMO2P15-201ENST00000604285 278 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC245389.1-201ENST00000605141 529 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC037198.3-201ENST00000616754 526 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC243312.2-201ENST00000623340 601 ntBASIC5.18□□□□□ -1.58
PHC3Q8NDX5 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PHC3Q8NDX5 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 U3.2-201ENST00000362981 210 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 Y_RNA.339-201ENST00000365325 102 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RNU6-946P-201ENST00000383878 107 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 MIR559-201ENST00000385188 96 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 MIR708-201ENST00000390708 88 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RNY4P36-201ENST00000391116 96 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 MIR548K-201ENST00000408406 116 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RPL37P10-201ENST00000412884 288 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 Y_RNA.639-201ENST00000458981 102 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC116533.1-201ENST00000459748 321 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RN7SL172P-201ENST00000460535 303 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 COPS8P2-201ENST00000473228 627 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC008953.1-201ENST00000497334 318 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC010350.1-201ENST00000504908 231 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RNU6-189P-201ENST00000516120 101 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RNU6-1095P-201ENST00000516148 108 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RNU6-685P-201ENST00000517088 95 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 TRMT10BP1-201ENST00000519377 943 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 OR11H5P-201ENST00000554039 926 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AP001836.1-201ENST00000604675 523 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AP000942.4-201ENST00000604811 241 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC080078.3-201ENST00000605407 463 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 MTND4LP32-201ENST00000636111 270 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 MIR4275-201ENST00000636486 87 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 AC074029.4-201ENST00000624796 1859 ntBASIC5.17□□□□□ -1.58
PHC3Q8NDX5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
PHC3Q8NDX5 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms