Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC019227.1-201ENST00000526902 510 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 MIR4474-201ENST00000579189 78 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC016542.2-201ENST00000624201 619 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 MTND4P1-201ENST00000457501 1466 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 RNU6-225P-201ENST00000384613 103 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC009965.2-201ENST00000425328 970 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 TRIM60P18-201ENST00000441518 828 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 RNU6-548P-201ENST00000517083 115 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 SYF2P1-201ENST00000550658 413 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AP001029.3-201ENST00000588063 596 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC008687.2-201ENST00000597865 520 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.85□□□□□ -1.95
VPS8Q8N3P4 AL590099.1-201ENST00000615276 138 ntBASIC2.85□□□□□ -1.95
VPS8Q8N3P4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 RPL7P54-201ENST00000438336 674 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 XKRY2-201ENST00000442362 1093 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 USP9YP15-201ENST00000442391 422 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 AC117522.2-201ENST00000510049 657 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 MTCO3P24-201ENST00000572729 782 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 YWHAQP7-201ENST00000603536 658 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 AC091834.1-201ENST00000614543 472 ntBASIC2.84□□□□□ -1.96
VPS8Q8N3P4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.84□□□□□ -1.96
VPS8Q8N3P4 AC011978.2-201ENST00000569835 2054 ntBASIC2.83□□□□□ -1.96
VPS8Q8N3P4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 MTCO1P9-201ENST00000505577 1534 ntBASIC2.83□□□□□ -1.96
VPS8Q8N3P4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.83□□□□□ -1.96
VPS8Q8N3P4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 AC023050.1-201ENST00000498198 304 ntBASIC2.83□□□□□ -1.96
VPS8Q8N3P4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VPS8Q8N3P4 KPNA2P1-201ENST00000458289 1591 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS8Q8N3P4 RNA5SP105-201ENST00000391123 113 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 RPL31P2-201ENST00000413849 377 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
VPS8Q8N3P4 RPL23AP63-201ENST00000498752 471 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 RNU6-250P-201ENST00000516958 103 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS8Q8N3P4 MIR3683-201ENST00000580847 82 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 LLPHP1-201ENST00000603571 367 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.82□□□□□ -1.96
VPS8Q8N3P4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 AL627390.1-201ENST00000396055 340 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS8Q8N3P4 RPL23AP20-201ENST00000447965 421 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.81□□□□□ -1.96
VPS8Q8N3P4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 RN7SKP219-201ENST00000516825 296 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 RNU6-943P-201ENST00000516960 98 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
VPS8Q8N3P4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS8Q8N3P4 OR11H5P-201ENST00000554039 926 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 AL049838.1-201ENST00000563647 981 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS8Q8N3P4 AL049779.4-201ENST00000604500 156 ntBASIC2.81□□□□□ -1.96
VPS8Q8N3P4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
VPS8Q8N3P4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 RNU1-17P-201ENST00000363022 152 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 RNA5SP213-201ENST00000391031 106 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 SNORA40.18-201ENST00000391200 128 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 VTA1P1-201ENST00000414044 866 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 RPL23AP39-201ENST00000415533 405 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 TRGV6-201ENST00000417928 299 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.8□□□□□ -1.96
VPS8Q8N3P4 AC114973.1-201ENST00000429057 632 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 MRPS33P4-201ENST00000434892 317 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 RPL21P103-201ENST00000479921 488 ntBASIC2.8□□□□□ -1.96
VPS8Q8N3P4 RNA5SP458-201ENST00000516188 119 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms