Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 MTND1P2-201ENST00000430604 821 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 KCTD9P3-201ENST00000434597 1169 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL356276.2-201ENST00000435919 558 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 Z99127.3-201ENST00000448158 395 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 NUTF2P3-201ENST00000448540 384 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 PSPHP1-201ENST00000450062 261 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC146507.1-201ENST00000468335 354 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL121769.1-201ENST00000469473 401 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 MTND1P3-201ENST00000484956 952 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC012170.1-201ENST00000495139 359 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC116353.2-201ENST00000505332 712 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC006390.1-201ENST00000508068 283 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC026726.1-201ENST00000512859 601 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 NRON-201ENST00000517270 370 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AP003122.4-201ENST00000530980 758 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 MIR3682-201ENST00000581338 84 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL359999.1-201ENST00000604513 294 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 MIR6868-201ENST00000611215 58 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 MIR6863-201ENST00000636112 90 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 AL049780.3-201ENST00000624612 1583 ntBASIC3.68□□□□□ -1.82
CLIP4Q8N3C7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 U8.3-201ENST00000363321 132 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RNU6-867P-201ENST00000364956 107 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 GSTA9P-201ENST00000406231 611 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 FCF1P10-201ENST00000407590 479 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RNU6-195P-201ENST00000411352 109 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RPL31P2-201ENST00000413849 377 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AL358934.1-201ENST00000432346 324 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 MTND4LP10-201ENST00000435146 291 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC009961.2-201ENST00000435771 251 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RPL17P49-201ENST00000443728 411 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 FAM103A2P-201ENST00000444122 354 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RPS11P1-201ENST00000451072 473 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AP001025.2-201ENST00000490908 477 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RNF138P1-201ENST00000502765 546 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC093767.1-201ENST00000504523 156 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC108078.1-201ENST00000508073 725 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RNU2-46P-201ENST00000517038 113 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AL391840.1-201ENST00000571144 367 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 HMGN1P30-201ENST00000589286 268 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 CKS1BP3-201ENST00000600888 237 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AL390208.1-201ENST00000605885 644 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AL592295.2-201ENST00000612578 206 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AL591424.2-201ENST00000617023 128 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 AC136475.10-201ENST00000620253 385 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 PISRT1-201ENST00000626175 531 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 MIR7641-1-201ENST00000627518 61 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 PRO1804-201ENST00000623780 2050 ntBASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
CLIP4Q8N3C7 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms