Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RSPO4Q2I0M5 MAPK10-270ENST00000641102 3538 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC011460.1-201ENST00000636268 1834 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC007996.1-201ENST00000620414 2821 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNU6-511P-201ENST00000363496 107 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNU6-61P-201ENST00000365528 109 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.418-201ENST00000384029 102 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNU6-1207P-201ENST00000384343 107 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 MIR105-1-201ENST00000385222 81 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 MIR320B1-201ENST00000390209 79 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNU6-550P-201ENST00000391057 101 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AL590290.1-201ENST00000405336 380 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNU6-130P-201ENST00000411112 103 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC140479.3-201ENST00000418944 1126 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC234779.1-201ENST00000425910 285 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RHOT1P3-201ENST00000436571 331 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC112498.1-201ENST00000444401 332 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC020893.1-201ENST00000502452 580 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC140172.1-201ENST00000502928 141 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNU6-202P-201ENST00000515998 96 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RNA5SP373-201ENST00000517271 95 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 COX6B1P6-201ENST00000522347 255 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC109446.1-201ENST00000566172 220 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC106782.4-201ENST00000568264 210 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AP005403.1-201ENST00000579720 229 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 U2.17-201ENST00000611454 95 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AL365222.1-201ENST00000614661 98 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 AC006484.1-201ENST00000435086 1884 ntBASIC5.2□□□□□ -1.58
RSPO4Q2I0M5 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 snoU2_19.2-201ENST00000363024 80 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 SNORD81.1-201ENST00000363064 77 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RNA5SP515-201ENST00000364570 118 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 Y_RNA.353-201ENST00000365440 108 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 U3.20-201ENST00000390909 217 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 BMS1P22-201ENST00000414726 313 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RPL36AP6-201ENST00000435770 321 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RPEP5-201ENST00000441137 268 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 CYCSP34-201ENST00000458172 304 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RNU7-169P-201ENST00000459456 61 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RPL21P8-201ENST00000465083 535 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 UBA52P3-201ENST00000491303 382 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 AC110792.1-201ENST00000491826 472 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RPS23P5-201ENST00000495419 428 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RPS24P16-201ENST00000497294 392 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RNU6-1338P-201ENST00000516328 91 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 RNU6-323P-201ENST00000521915 107 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 MIR3667-201ENST00000581025 74 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 AL078605.1-201ENST00000603529 500 ntBASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RSPO4Q2I0M5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms