Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 RNU6-666P-201ENST00000363499 107 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 DYNLT3P1-201ENST00000378574 347 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 MIR221-201ENST00000385135 110 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 HMGB1P10-201ENST00000395823 563 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 XKRYP4-201ENST00000414395 483 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 XKRYP5-201ENST00000449659 483 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 OR52A4P-203ENST00000498233 1014 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 AC007536.1-201ENST00000533382 349 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 AC011374.2-201ENST00000607135 526 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 AL137847.3-201ENST00000611521 109 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 VN1R7P-201ENST00000619242 903 ntBASIC2.69□□□□□ -1.98
CACNA1SQ13698 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.69□□□□□ -1.98
CACNA1SQ13698 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
CACNA1SQ13698 RNU1-51P-201ENST00000365345 176 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.68□□□□□ -1.98
CACNA1SQ13698 MIR7-1-201ENST00000384871 110 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.68□□□□□ -1.98
CACNA1SQ13698 AL096701.2-201ENST00000416920 238 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 Z82205.1-201ENST00000428456 297 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 AC092427.1-202ENST00000430569 476 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 AC098826.1-201ENST00000433943 471 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 RPL7P5-201ENST00000471472 736 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 AC004263.1-201ENST00000479327 332 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 FABP5P6-201ENST00000510588 409 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 OR4R2P-201ENST00000530815 597 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 ADAM3B-201ENST00000569937 840 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 AC012182.1-201ENST00000570133 895 ntBASIC2.68□□□□□ -1.98
CACNA1SQ13698 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.68□□□□□ -1.98
CACNA1SQ13698 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CACNA1SQ13698 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CACNA1SQ13698 AC022336.2-201ENST00000568966 2538 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 RNU6-891P-201ENST00000384280 111 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 EI24P1-201ENST00000416584 867 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC003989.2-201ENST00000440224 169 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 HMGB1P48-201ENST00000446155 598 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC104472.2-201ENST00000469035 601 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 SUMO1P1-201ENST00000497904 306 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC010198.2-201ENST00000550612 259 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC022387.2-201ENST00000604050 448 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC055764.2-201ENST00000610089 670 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AL161431.1-201ENST00000618966 4205 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CACNA1SQ13698 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 DPPA2P1-201ENST00000428060 556 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 NDUFA5P10-201ENST00000432147 357 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC007677.1-201ENST00000445757 515 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 HMGB1P26-201ENST00000452520 628 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 RNU6-1004P-201ENST00000516584 111 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 RN7SKP96-201ENST00000516948 297 ntBASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.67□□□□□ -1.98
CACNA1SQ13698 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CACNA1SQ13698 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CACNA1SQ13698 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 ARPC3P2-201ENST00000457786 533 ntBASIC2.66□□□□□ -1.98
CACNA1SQ13698 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 RNU6-1308P-201ENST00000516817 103 ntBASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 POLR2KP1-201ENST00000553226 168 ntBASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC016911.1-201ENST00000613297 452 ntBASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC091834.1-201ENST00000614543 472 ntBASIC2.66□□□□□ -1.98
CACNA1SQ13698 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CACNA1SQ13698 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CACNA1SQ13698 Y_RNA.118-201ENST00000363300 101 ntBASIC2.65□□□□□ -1.98
CACNA1SQ13698 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CACNA1SQ13698 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CACNA1SQ13698 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CACNA1SQ13698 HNRNPDP2-201ENST00000406475 478 ntBASIC2.65□□□□□ -1.98
CACNA1SQ13698 AL445685.2-201ENST00000422551 342 ntBASIC2.65□□□□□ -1.98
CACNA1SQ13698 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.65□□□□□ -1.98
CACNA1SQ13698 AC108667.1-201ENST00000428618 249 ntBASIC2.65□□□□□ -1.98
CACNA1SQ13698 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
CACNA1SQ13698 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.65□□□□□ -1.98
CACNA1SQ13698 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.65□□□□□ -1.98
CACNA1SQ13698 SCARNA16.3-201ENST00000516595 184 ntBASIC2.65□□□□□ -1.98
CACNA1SQ13698 RNU6-551P-201ENST00000516661 103 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms