Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.14□□□□□ -2.23
RPL39P62891 MTCO1P4-201ENST00000520516 1409 ntBASIC1.14□□□□□ -2.23
RPL39P62891 ZNF355P-201ENST00000427301 3216 ntBASIC1.13□□□□□ -2.23
RPL39P62891 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RPL39P62891 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 AC103710.2-202ENST00000641454 2853 ntBASIC1.13□□□□□ -2.23
RPL39P62891 HMGB1P5-201ENST00000255320 642 ntBASIC1.13□□□□□ -2.23
RPL39P62891 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RPL39P62891 RNU4-82P-201ENST00000362443 140 ntBASIC1.13□□□□□ -2.23
RPL39P62891 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 TAS2R15P-201ENST00000390674 928 ntBASIC1.13□□□□□ -2.23
RPL39P62891 MCTS2P-201ENST00000394552 546 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AL121972.1-201ENST00000402023 252 ntBASIC1.13□□□□□ -2.23
RPL39P62891 SNORA11.1-201ENST00000408133 129 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.13□□□□□ -2.23
RPL39P62891 AC106901.1-201ENST00000425086 698 ntBASIC1.13□□□□□ -2.23
RPL39P62891 RPL7P37-201ENST00000425095 738 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.13□□□□□ -2.23
RPL39P62891 GPM6BP3-201ENST00000442797 145 ntBASIC1.13□□□□□ -2.23
RPL39P62891 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.13□□□□□ -2.23
RPL39P62891 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 AC069528.1-202ENST00000482888 637 ntBASIC1.13□□□□□ -2.23
RPL39P62891 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 AC092436.1-201ENST00000506450 503 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.13□□□□□ -2.23
RPL39P62891 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 CASP1P1-201ENST00000526345 212 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AC087276.1-201ENST00000529659 480 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 HSPE1P3-201ENST00000559254 309 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.13□□□□□ -2.23
RPL39P62891 AC106782.4-201ENST00000568264 210 ntBASIC1.13□□□□□ -2.23
RPL39P62891 UBE2L4-201ENST00000587688 464 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AC090953.1-201ENST00000604305 1092 ntBASIC1.13□□□□□ -2.23
RPL39P62891 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.13□□□□□ -2.23
RPL39P62891 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.13□□□□□ -2.23
RPL39P62891 MTND4P27-201ENST00000450813 1354 ntBASIC1.12□□□□□ -2.23
RPL39P62891 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.12□□□□□ -2.23
RPL39P62891 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
RPL39P62891 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
RPL39P62891 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RPL39P62891 RNU6-253P-201ENST00000384730 105 ntBASIC1.12□□□□□ -2.23
RPL39P62891 GSTA9P-201ENST00000406231 611 ntBASIC1.12□□□□□ -2.23
RPL39P62891 SNORA3.2-201ENST00000408221 125 ntBASIC1.12□□□□□ -2.23
RPL39P62891 Z85995.1-201ENST00000415547 335 ntBASIC1.12□□□□□ -2.23
RPL39P62891 TOMM22P1-201ENST00000418578 312 ntBASIC1.12□□□□□ -2.23
RPL39P62891 RPL31P63-201ENST00000422565 375 ntBASIC1.12□□□□□ -2.23
RPL39P62891 PTP4A1P3-201ENST00000433661 420 ntBASIC1.12□□□□□ -2.23
RPL39P62891 IFNA11P-201ENST00000446352 526 ntBASIC1.12□□□□□ -2.23
RPL39P62891 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.12□□□□□ -2.23
RPL39P62891 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.12□□□□□ -2.23
RPL39P62891 AL035407.2-201ENST00000454090 378 ntBASIC1.12□□□□□ -2.23
RPL39P62891 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.12□□□□□ -2.23
RPL39P62891 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.12□□□□□ -2.23
RPL39P62891 RPL30P9-201ENST00000465586 330 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AC023790.1-201ENST00000482174 347 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.12□□□□□ -2.23
RPL39P62891 AC109471.1-201ENST00000511631 612 ntBASIC1.12□□□□□ -2.23
RPL39P62891 HSPE1P18-201ENST00000517602 280 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AP005435.4-201ENST00000529514 284 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AC022884.3-201ENST00000579571 248 ntBASIC1.12□□□□□ -2.23
RPL39P62891 RPAP2P1-201ENST00000603626 1168 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AC008962.1-201ENST00000605729 304 ntBASIC1.12□□□□□ -2.23
RPL39P62891 uc_338.5-201ENST00000611839 155 ntBASIC1.12□□□□□ -2.23
RPL39P62891 MIR6798-201ENST00000612887 67 ntBASIC1.12□□□□□ -2.23
RPL39P62891 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
RPL39P62891 AC084768.2-201ENST00000622736 221 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AL356118.1-201ENST00000635272 1078 ntBASIC1.12□□□□□ -2.23
RPL39P62891 AC110994.2-201ENST00000635481 492 ntBASIC1.12□□□□□ -2.23
RPL39P62891 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
RPL39P62891 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
RPL39P62891 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
RPL39P62891 MTND4P23-201ENST00000447723 1363 ntBASIC1.11□□□□□ -2.23
RPL39P62891 MIR320A-201ENST00000385302 82 ntBASIC1.11□□□□□ -2.23
RPL39P62891 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
RPL39P62891 SNORA40.18-201ENST00000391200 128 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AP002784.2-201ENST00000397300 549 ntBASIC1.11□□□□□ -2.23
RPL39P62891 SNRPEP2-201ENST00000397592 279 ntBASIC1.11□□□□□ -2.23
RPL39P62891 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AC105402.1-201ENST00000413336 545 ntBASIC1.11□□□□□ -2.23
RPL39P62891 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPL39P62891 NPM1P11-201ENST00000417106 855 ntBASIC1.11□□□□□ -2.23
RPL39P62891 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL39P62891 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL39P62891 SNRPFP2-201ENST00000440710 251 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AL360221.1-201ENST00000445989 335 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AL049873.1-201ENST00000480540 376 ntBASIC1.11□□□□□ -2.23
RPL39P62891 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL39P62891 RPL23AP63-201ENST00000498752 471 ntBASIC1.11□□□□□ -2.23
RPL39P62891 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RPL39P62891 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.11□□□□□ -2.23
RPL39P62891 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.11□□□□□ -2.23
RPL39P62891 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms