Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 RPS4XP10-201ENST00000465034 731 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC006445.1-201ENST00000491925 405 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC025459.1-201ENST00000504072 156 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.83□□□□□ -2.12
CKS1BP61024 MRPS36P2-201ENST00000512569 299 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 SNORA70.16-201ENST00000516390 95 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC1.83□□□□□ -2.12
CKS1BP61024 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.83□□□□□ -2.12
CKS1BP61024 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC011471.1-201ENST00000585766 187 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC002984.1-201ENST00000591692 448 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.83□□□□□ -2.12
CKS1BP61024 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC098657.3-201ENST00000620434 263 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 MIR6810-201ENST00000622701 70 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 CR381653.2-201ENST00000624041 768 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.83□□□□□ -2.12
CKS1BP61024 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.83□□□□□ -2.12
CKS1BP61024 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.83□□□□□ -2.12
CKS1BP61024 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CKS1BP61024 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.82□□□□□ -2.12
CKS1BP61024 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CKS1BP61024 TPTE2P4-201ENST00000258589 1605 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CKS1BP61024 MIR422A-201ENST00000362286 90 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 RNA5SP267-201ENST00000364893 126 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 SNORA54-201ENST00000384281 123 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CKS1BP61024 RNU4-74P-201ENST00000411280 161 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.82□□□□□ -2.12
CKS1BP61024 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 MTCO1P39-201ENST00000426148 480 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.82□□□□□ -2.12
CKS1BP61024 TRGVB-201ENST00000453257 471 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 RN7SL504P-201ENST00000494496 287 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 GTF2IP9-201ENST00000502460 301 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.82□□□□□ -2.12
CKS1BP61024 AC091826.1-201ENST00000514065 313 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.82□□□□□ -2.12
CKS1BP61024 AC022634.1-201ENST00000520765 532 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.82□□□□□ -2.12
CKS1BP61024 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC1.82□□□□□ -2.12
CKS1BP61024 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 MTCO1P40-201ENST00000574371 625 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC090312.2-201ENST00000582687 378 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
CKS1BP61024 AC006539.2-201ENST00000601729 572 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC135507.1-201ENST00000607214 561 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CKS1BP61024 AC090116.1-201ENST00000615679 446 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC025016.1-201ENST00000616746 682 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 AC012314.7-201ENST00000619693 93 ntBASIC1.82□□□□□ -2.12
CKS1BP61024 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CKS1BP61024 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CKS1BP61024 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CKS1BP61024 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CKS1BP61024 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CKS1BP61024 RNU6-173P-201ENST00000364215 104 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 SNORA16B-201ENST00000364674 135 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AL136372.1-201ENST00000403060 228 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 RNU2-40P-201ENST00000410833 196 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 HMGB3P2-201ENST00000411913 584 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.81□□□□□ -2.12
CKS1BP61024 RPL27AP8-201ENST00000424277 446 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.81□□□□□ -2.12
CKS1BP61024 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC1.81□□□□□ -2.12
CKS1BP61024 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AC233982.1-201ENST00000451247 436 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 RNA5SP233-201ENST00000459153 113 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 OR52A4P-202ENST00000481634 799 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 OR52A4P-203ENST00000498233 1014 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 MTCYBP17-201ENST00000503579 789 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.81□□□□□ -2.12
CKS1BP61024 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AC025755.1-201ENST00000521306 278 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CKS1BP61024 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.81□□□□□ -2.12
CKS1BP61024 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.81□□□□□ -2.12
CKS1BP61024 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC1.81□□□□□ -2.12
CKS1BP61024 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.81□□□□□ -2.12
CKS1BP61024 MIR4635-201ENST00000583759 79 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AC008749.1-201ENST00000597650 306 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AC025588.3-201ENST00000604182 274 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AL731566.2-201ENST00000618971 317 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 AL353748.2-201ENST00000622148 471 ntBASIC1.81□□□□□ -2.12
CKS1BP61024 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.81□□□□□ -2.12
CKS1BP61024 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.81□□□□□ -2.12
CKS1BP61024 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.81□□□□□ -2.12
CKS1BP61024 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.81□□□□□ -2.12
CKS1BP61024 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CKS1BP61024 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CKS1BP61024 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.81□□□□□ -2.12
CKS1BP61024 CKAP2P1-201ENST00000555477 2049 ntBASIC1.8□□□□□ -2.12
CKS1BP61024 MIRLET7G-201ENST00000362280 84 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms