Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.91□□□□□ -1.94
PKNOX1P55347 VN1R83P-201ENST00000595685 445 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AL035411.2-201ENST00000604022 421 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC024257.5-201ENST00000612739 531 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AL355810.1-201ENST00000614629 552 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 CYCSP41-201ENST00000616920 296 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 AC090617.7-201ENST00000623952 126 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 MIR6733-201ENST00000635723 61 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PKNOX1P55347 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PKNOX1P55347 SGO1P2-201ENST00000429458 1589 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 ASNSP3-201ENST00000451989 1306 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 AC107982.1-201ENST00000507171 1300 ntBASIC2.91□□□□□ -1.94
PKNOX1P55347 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
PKNOX1P55347 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.9□□□□□ -1.94
PKNOX1P55347 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.9□□□□□ -1.95
PKNOX1P55347 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PKNOX1P55347 RNU6-878P-201ENST00000384578 110 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PKNOX1P55347 CYCSP45-201ENST00000402289 315 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AL451074.5-201ENST00000415894 435 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 EZH2P1-201ENST00000431167 291 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 MTCYBP34-201ENST00000439552 670 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 RNF2P1-201ENST00000442955 1010 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 RPL17P49-201ENST00000443728 411 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 PRDX3P3-201ENST00000447765 522 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 RFC5P1-201ENST00000454419 874 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 MTATP6P14-201ENST00000455189 673 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 RPS4XP10-201ENST00000465034 731 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 RPS23P3-201ENST00000470993 430 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 RPS29P2-201ENST00000479278 136 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 ARL4AP2-201ENST00000507378 601 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC113420.1-201ENST00000507903 571 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.9□□□□□ -1.95
PKNOX1P55347 RNU6-1225P-201ENST00000516336 65 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 SNORA67.7-201ENST00000516664 135 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 SNRPGP16-201ENST00000533275 226 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC034105.3-201ENST00000565294 442 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.9□□□□□ -1.95
PKNOX1P55347 BDH2P1-201ENST00000602288 736 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AL390838.2-201ENST00000602394 274 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC069431.2-201ENST00000604149 1099 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 ELOCP35-201ENST00000604289 336 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.9□□□□□ -1.95
PKNOX1P55347 AC006133.1-201ENST00000617106 264 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AL161637.1-201ENST00000622380 412 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.9□□□□□ -1.95
PKNOX1P55347 AC013437.2-201ENST00000639587 677 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PKNOX1P55347 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PKNOX1P55347 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.95
PKNOX1P55347 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.9□□□□□ -1.95
PKNOX1P55347 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.89□□□□□ -1.95
PKNOX1P55347 SNORA63.1-201ENST00000362493 131 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 Y_RNA.472-201ENST00000384322 102 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 SNORA26.7-201ENST00000391288 122 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 RNU6-1077P-201ENST00000410506 102 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC068533.2-201ENST00000411872 306 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC109780.2-201ENST00000413467 845 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 UBE2D3P2-201ENST00000424409 445 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.89□□□□□ -1.95
PKNOX1P55347 SNRPEP4-201ENST00000435815 279 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 YWHAZP7-201ENST00000436906 631 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC091862.1-201ENST00000438016 1100 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 RPS29P6-201ENST00000438196 145 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 RPL21P2-201ENST00000440049 481 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 CDC27P1-201ENST00000445384 715 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 MTCYBP11-201ENST00000447254 1109 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.89□□□□□ -1.95
PKNOX1P55347 TRGVB-201ENST00000453257 471 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 Z82190.1-201ENST00000454534 490 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AL590639.1-201ENST00000456484 337 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC026410.2-201ENST00000460281 156 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 RN7SL601P-201ENST00000471221 293 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 RPL32P34-201ENST00000486380 400 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.89□□□□□ -1.95
PKNOX1P55347 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.89□□□□□ -1.95
PKNOX1P55347 SNORD59.2-201ENST00000516873 68 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.89□□□□□ -1.95
PKNOX1P55347 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PKNOX1P55347 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 HIGD1AP17-201ENST00000554576 276 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 YWHAZP1-201ENST00000556286 722 ntBASIC2.89□□□□□ -1.95
PKNOX1P55347 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.89□□□□□ -1.95
PKNOX1P55347 AC092435.3-201ENST00000565538 3654 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms