Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 HMGB1P28-201ENST00000507778 552 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC006390.1-201ENST00000508068 283 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 POU5F1P7-201ENST00000508759 541 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 AC109445.1-201ENST00000512356 383 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 RNU6-27P-201ENST00000516146 107 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 RNU6-311P-201ENST00000516224 102 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 RNU6-415P-201ENST00000516252 97 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 RN7SKP57-201ENST00000517248 293 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC239860.2-201ENST00000525886 270 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.27□□□□□ -1.89
TRIM23P36406 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.27□□□□□ -1.89
TRIM23P36406 MIR5004-201ENST00000579078 107 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC015917.1-201ENST00000579654 510 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC010738.1-201ENST00000604970 987 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AC107075.1-201ENST00000613695 314 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 SNORD39.4-201ENST00000620099 78 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 AL078595.3-201ENST00000623815 1166 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 MIR1322-201ENST00000638013 71 ntBASIC3.27□□□□□ -1.89
TRIM23P36406 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM23P36406 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.27□□□□□ -1.89
TRIM23P36406 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
TRIM23P36406 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TRIM23P36406 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM23P36406 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM23P36406 AC058791.1-201ENST00000608412 3198 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM23P36406 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 RNU6-1122P-201ENST00000384449 107 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 RPL5P18-201ENST00000406671 891 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC068533.2-201ENST00000411872 306 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 AC099677.1-201ENST00000420575 175 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM23P36406 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM23P36406 EZH2P1-201ENST00000431167 291 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC091862.1-201ENST00000438016 1100 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 AL445669.2-201ENST00000454425 421 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC026410.2-201ENST00000460281 156 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 RPS15AP17-201ENST00000470598 390 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC026427.2-201ENST00000506228 536 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.26□□□□□ -1.89
TRIM23P36406 AC010625.1-201ENST00000511296 403 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM23P36406 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM23P36406 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM23P36406 AP001372.4-201ENST00000524889 472 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 HIGD1AP1-201ENST00000550979 275 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM23P36406 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.26□□□□□ -1.89
TRIM23P36406 TGIF1P1-201ENST00000558095 802 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC023813.2-201ENST00000564321 469 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM23P36406 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.26□□□□□ -1.89
TRIM23P36406 MIR3200-201ENST00000580767 85 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 MAGOH2P-202ENST00000584384 429 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 MIR8057-201ENST00000620957 69 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.26□□□□□ -1.89
TRIM23P36406 U6.101-201ENST00000637707 76 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
TRIM23P36406 AF117829.1-206ENST00000621883 3802 ntBASIC3.26□□□□□ -1.89
TRIM23P36406 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
TRIM23P36406 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRIM23P36406 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 AL079343.1-201ENST00000572358 1771 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.25□□□□□ -1.89
TRIM23P36406 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.25□□□□□ -1.89
TRIM23P36406 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRIM23P36406 SNORD116.1-201ENST00000365628 92 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 RNU6-1074P-201ENST00000383995 104 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 RNU2-15P-201ENST00000410692 191 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AL356968.1-201ENST00000416622 474 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 ELOCP9-201ENST00000418624 239 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 HMGB1P49-201ENST00000418882 569 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 TIMM9P2-201ENST00000419324 266 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AC006028.1-201ENST00000438379 402 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AC009969.1-201ENST00000438726 172 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 TRGVB-201ENST00000453257 471 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 RPL18AP17-201ENST00000455326 198 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 SUMO2P2-201ENST00000456482 255 ntBASIC3.25□□□□□ -1.89
TRIM23P36406 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.25□□□□□ -1.89
TRIM23P36406 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms