Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
HMGCLP35914 AC091951.3-201ENST00000504093 246 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 HMGB1P28-201ENST00000507778 552 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 SNORA64.4-201ENST00000516632 81 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AC105185.1-201ENST00000518705 535 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.17□□□□□ -1.9
HMGCLP35914 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCLP35914 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 LSM6P2-201ENST00000552208 177 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 DUXAP1-201ENST00000556632 463 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCLP35914 MIR5004-201ENST00000579078 107 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 BNIP3P33-201ENST00000598912 569 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AC009220.3-201ENST00000604318 586 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AL592221.1-201ENST00000605266 382 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AF117829.1-206ENST00000621883 3802 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCLP35914 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCLP35914 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCLP35914 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCLP35914 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.17□□□□□ -1.9
HMGCLP35914 AC004925.1-201ENST00000624256 2706 ntBASIC3.17□□□□□ -1.9
HMGCLP35914 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
HMGCLP35914 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCLP35914 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 SNORA7.4-201ENST00000384249 137 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HMGCLP35914 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 HMGB1P17-201ENST00000403495 628 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AL023807.1-201ENST00000407932 359 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCLP35914 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
HMGCLP35914 AL353678.1-201ENST00000422735 741 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 PSMA2P3-201ENST00000429685 675 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 RPL23AP69-201ENST00000431134 458 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCLP35914 AC098826.2-201ENST00000452011 651 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC034236.1-201ENST00000469891 373 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 AL136126.1-201ENST00000473603 402 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HMGCLP35914 AC006499.2-201ENST00000513470 337 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 RNA5SP217-201ENST00000515959 91 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
HMGCLP35914 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCLP35914 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.16□□□□□ -1.9
HMGCLP35914 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 HSPE1P3-201ENST00000559254 309 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC009094.1-201ENST00000564443 426 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HMGCLP35914 OR4G1P-201ENST00000588632 938 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC245036.5-201ENST00000596330 847 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGCLP35914 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 YWHAQP7-201ENST00000603536 658 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 YPEL5P2-201ENST00000605553 359 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AL159169.3-201ENST00000608871 561 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AL591516.1-201ENST00000611326 274 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC231759.1-201ENST00000616455 597 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC092650.2-201ENST00000619984 902 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC018692.3-201ENST00000623929 123 ntBASIC3.16□□□□□ -1.9
HMGCLP35914 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.16□□□□□ -1.9
HMGCLP35914 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.16□□□□□ -1.9
HMGCLP35914 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.16□□□□□ -1.9
HMGCLP35914 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HMGCLP35914 FAM35CP-201ENST00000554755 2470 ntBASIC3.15□□□□□ -1.9
HMGCLP35914 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HMGCLP35914 AC004972.1-201ENST00000623934 2209 ntBASIC3.15□□□□□ -1.9
HMGCLP35914 AC002546.1-201ENST00000588041 2504 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGCLP35914 RNU6-1214P-201ENST00000363650 109 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 DYNLT3P1-201ENST00000378574 347 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 AL024474.1-201ENST00000404655 591 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 AL354719.1-201ENST00000406535 843 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.15□□□□□ -1.91
HMGCLP35914 RNU2-28P-201ENST00000410457 189 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HMGCLP35914 AC006960.1-201ENST00000419980 153 ntBASIC3.15□□□□□ -1.91
HMGCLP35914 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms