Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HOXC12P31275 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.71□□□□□ -1.66
HOXC12P31275 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 RNU6-1252P-201ENST00000363054 104 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 RN7SKP153-201ENST00000365026 316 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 SNORA23-201ENST00000365128 182 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXC12P31275 RNU6-550P-201ENST00000391057 101 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 U3.36-201ENST00000408418 213 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 RPL26P29-201ENST00000415623 438 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 RPS7P15-201ENST00000415804 584 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC093655.2-201ENST00000425735 631 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 CALM2P2-201ENST00000428512 440 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 MTCYBP6-201ENST00000441810 138 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 MTND4P19-201ENST00000446659 478 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC020550.1-201ENST00000447385 163 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC079168.1-201ENST00000458741 345 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 SCARNA18-201ENST00000459004 134 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 MTCO1P29-201ENST00000496868 288 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 RN7SKP13-201ENST00000515933 244 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 AP004607.2-201ENST00000533949 322 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC12P31275 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 FRG2DP-202ENST00000566967 323 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.7□□□□□ -1.66
HOXC12P31275 MIR3942-201ENST00000585264 109 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.7□□□□□ -1.66
HOXC12P31275 BNIP3P22-201ENST00000593399 556 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AL158032.1-201ENST00000605401 106 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 FAM25E-202ENST00000608562 189 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 AC099669.2-201ENST00000616549 437 ntBASIC4.7□□□□□ -1.66
HOXC12P31275 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXC12P31275 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HOXC12P31275 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC12P31275 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HOXC12P31275 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXC12P31275 PNPT1P2-201ENST00000456768 2050 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC116667.1-201ENST00000604855 2072 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC12P31275 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC12P31275 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 AC026951.1-201ENST00000559530 2459 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXC12P31275 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 RNU1-43P-201ENST00000365052 165 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC12P31275 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HOXC12P31275 NDUFS5P1-201ENST00000405668 289 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC12P31275 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC12P31275 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC12P31275 AL121871.1-201ENST00000443413 436 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 RPS11P1-201ENST00000451072 473 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC12P31275 RNU7-66P-201ENST00000459469 62 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AP000797.2-201ENST00000475768 606 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 RNU6-559P-201ENST00000516151 98 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 HMGB1P19-201ENST00000517578 577 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC12P31275 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC12P31275 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXC12P31275 POLR3GP2-201ENST00000588366 668 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 BNIP3P25-201ENST00000596023 559 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 LLPHP1-201ENST00000603571 367 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC092747.3-201ENST00000603769 301 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC004696.1-201ENST00000614345 607 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXC12P31275 AC019278.1-201ENST00000623516 479 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC12P31275 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC12P31275 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
HOXC12P31275 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC12P31275 MTND5P3-201ENST00000438536 1800 ntBASIC4.69□□□□□ -1.66
HOXC12P31275 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXC12P31275 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXC12P31275 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms