Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP1P30622 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
CLIP1P30622 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.92□□□□□ -1.94
CLIP1P30622 AC104564.1-201ENST00000493028 407 ntBASIC2.92□□□□□ -1.94
CLIP1P30622 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.92□□□□□ -1.94
CLIP1P30622 AL356280.1-201ENST00000603614 379 ntBASIC2.92□□□□□ -1.94
CLIP1P30622 AC011890.2-201ENST00000613393 294 ntBASIC2.92□□□□□ -1.94
CLIP1P30622 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLIP1P30622 NSRP1P1-201ENST00000444067 1693 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLIP1P30622 HSPE1P26-201ENST00000405341 275 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 AC022431.1-201ENST00000450941 438 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.91□□□□□ -1.94
CLIP1P30622 RNU1-40P-201ENST00000516816 164 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 RNU1-97P-201ENST00000516872 164 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 AC090695.1-201ENST00000561269 1222 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 AC023043.2-201ENST00000589678 1026 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 AC010678.1-201ENST00000614118 713 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 AC092159.4-201ENST00000624944 550 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 WWP1P1-201ENST00000466609 2769 ntBASIC2.91□□□□□ -1.94
CLIP1P30622 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
CLIP1P30622 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.9□□□□□ -1.94
CLIP1P30622 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CLIP1P30622 NPM1P10-201ENST00000398310 865 ntBASIC2.9□□□□□ -1.95
CLIP1P30622 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
CLIP1P30622 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.9□□□□□ -1.95
CLIP1P30622 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP1P30622 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP1P30622 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLIP1P30622 AC011352.3-201ENST00000505162 593 ntBASIC2.9□□□□□ -1.95
CLIP1P30622 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.9□□□□□ -1.95
CLIP1P30622 AL163153.1-201ENST00000554223 283 ntBASIC2.9□□□□□ -1.95
CLIP1P30622 GMCL1P2-201ENST00000605230 823 ntBASIC2.9□□□□□ -1.95
CLIP1P30622 HMGN2P28-201ENST00000606102 262 ntBASIC2.9□□□□□ -1.95
CLIP1P30622 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLIP1P30622 AC240504.1-201ENST00000395709 845 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 RPL19P1-201ENST00000411635 428 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 HMGB3P2-201ENST00000411913 584 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 MTND1P23-201ENST00000416931 372 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.89□□□□□ -1.95
CLIP1P30622 AL031659.1-201ENST00000447075 539 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 UBE2V2P4-201ENST00000447495 259 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 SCARNA17.1-201ENST00000516211 143 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 SCARNA17.2-201ENST00000516334 143 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 AC084757.1-201ENST00000559987 490 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 VN1R74P-201ENST00000613259 503 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 SCARNA17.4-201ENST00000614296 143 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 AC091953.2-201ENST00000623979 160 ntBASIC2.89□□□□□ -1.95
CLIP1P30622 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CLIP1P30622 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLIP1P30622 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CLIP1P30622 RNU6-457P-201ENST00000363999 107 ntBASIC2.88□□□□□ -1.95
CLIP1P30622 RPL17P12-201ENST00000413391 526 ntBASIC2.88□□□□□ -1.95
CLIP1P30622 TRIM60P18-201ENST00000441518 828 ntBASIC2.88□□□□□ -1.95
CLIP1P30622 AC107393.1-201ENST00000512403 346 ntBASIC2.88□□□□□ -1.95
CLIP1P30622 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.88□□□□□ -1.95
CLIP1P30622 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.88□□□□□ -1.95
CLIP1P30622 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.88□□□□□ -1.95
CLIP1P30622 AC116447.1-201ENST00000613153 453 ntBASIC2.88□□□□□ -1.95
CLIP1P30622 RNU6-14P-201ENST00000384630 106 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 MIR124-3-201ENST00000384866 87 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 SSXP9-201ENST00000417503 292 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.87□□□□□ -1.95
CLIP1P30622 USP9YP15-201ENST00000442391 422 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 AC104308.1-201ENST00000454621 333 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.87□□□□□ -1.95
CLIP1P30622 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.87□□□□□ -1.95
CLIP1P30622 RNU6-250P-201ENST00000516958 103 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.87□□□□□ -1.95
CLIP1P30622 AC239860.2-201ENST00000525886 270 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 SETP2-201ENST00000553886 926 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.87□□□□□ -1.95
CLIP1P30622 RPL23AP88-201ENST00000605759 454 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 CFTRP2-201ENST00000634304 199 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 AC011978.2-201ENST00000569835 2054 ntBASIC2.87□□□□□ -1.95
CLIP1P30622 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP1P30622 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP1P30622 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP1P30622 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP1P30622 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP1P30622 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.86□□□□□ -1.95
CLIP1P30622 RNU6-1053P-201ENST00000515930 101 ntBASIC2.86□□□□□ -1.95
CLIP1P30622 SNORA25.15-201ENST00000516487 89 ntBASIC2.86□□□□□ -1.95
CLIP1P30622 AC104115.2-201ENST00000523026 687 ntBASIC2.86□□□□□ -1.95
CLIP1P30622 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.86□□□□□ -1.95
CLIP1P30622 MIR4458-201ENST00000578872 75 ntBASIC2.86□□□□□ -1.95
CLIP1P30622 AP003117.2-201ENST00000606010 545 ntBASIC2.86□□□□□ -1.95
CLIP1P30622 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.86□□□□□ -1.95
CLIP1P30622 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.86□□□□□ -1.95
CLIP1P30622 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLIP1P30622 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CLIP1P30622 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP1P30622 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLIP1P30622 U8.10-201ENST00000384260 133 ntBASIC2.85□□□□□ -1.95
CLIP1P30622 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.85□□□□□ -1.95
CLIP1P30622 Z82205.1-201ENST00000428456 297 ntBASIC2.85□□□□□ -1.95
CLIP1P30622 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.85□□□□□ -1.95
CLIP1P30622 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms