Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC099654.2-201ENST00000433031 1980 ntBASIC4.72□□□□□ -1.65
COL6A2P12110 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL6A2P12110 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
COL6A2P12110 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
COL6A2P12110 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL6A2P12110 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
COL6A2P12110 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.72□□□□□ -1.65
COL6A2P12110 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.71□□□□□ -1.65
COL6A2P12110 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
COL6A2P12110 AC027287.1-201ENST00000553115 1453 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 RNU6-38P-201ENST00000384085 107 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
COL6A2P12110 TXNP7-201ENST00000406296 293 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AL356967.1-201ENST00000406305 431 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 SPTLC1P2-201ENST00000407089 121 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 GJA6P-201ENST00000415117 1042 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AL354751.2-201ENST00000415471 210 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 AC005008.1-201ENST00000456151 612 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RPL36AP13-201ENST00000457490 317 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RNU6-333P-201ENST00000459117 107 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC007547.1-201ENST00000462177 490 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC005532.2-201ENST00000467154 373 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 HMGB1P25-201ENST00000468402 607 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RPL7P19-201ENST00000469948 618 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 RN7SL727P-201ENST00000482164 296 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 MRPS33P2-201ENST00000507850 322 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC117522.3-201ENST00000507974 584 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC004062.1-201ENST00000509926 645 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RNU6-798P-201ENST00000516912 103 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RN7SKP256-201ENST00000517201 314 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.71□□□□□ -1.66
COL6A2P12110 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 MIR4424-201ENST00000585257 86 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AL031666.3-201ENST00000609320 1006 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 AC040168.1-201ENST00000623594 991 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.71□□□□□ -1.66
COL6A2P12110 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.71□□□□□ -1.66
COL6A2P12110 AL672167.1-203ENST00000641299 2975 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 LINC01355-201ENST00000566551 5444 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 FAM91A3P-201ENST00000456826 2544 ntBASIC4.71□□□□□ -1.66
COL6A2P12110 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.71□□□□□ -1.66
COL6A2P12110 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL6A2P12110 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC073343.1-201ENST00000328239 651 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 Y_RNA.58-201ENST00000362807 102 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 SNORA63-201ENST00000363450 132 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 Y_RNA.154-201ENST00000363624 102 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RNY3P1-201ENST00000365085 102 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RNY3-201ENST00000365484 102 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RNU4-20P-201ENST00000365601 151 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 SNORA32.2-201ENST00000384049 122 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 Y_RNA.490-201ENST00000384413 102 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 MIR195-201ENST00000385194 87 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 MT-TC-201ENST00000387405 66 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AL590762.2-201ENST00000395798 571 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RNU6-516P-201ENST00000411381 104 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RAB28P1-201ENST00000411517 641 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC009237.10-201ENST00000414112 510 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 OR2AM1P-201ENST00000422137 422 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AL645608.4-201ENST00000423619 154 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.7□□□□□ -1.66
COL6A2P12110 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.7□□□□□ -1.66
COL6A2P12110 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.7□□□□□ -1.66
COL6A2P12110 HMGB3P21-201ENST00000452483 547 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 AC006967.1-201ENST00000467608 589 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 RPS18P6-201ENST00000476880 458 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.7□□□□□ -1.66
COL6A2P12110 AC025164.1-201ENST00000496249 478 ntBASIC4.7□□□□□ -1.66
COL6A2P12110 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
COL6A2P12110 AC140172.1-201ENST00000502928 141 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms