Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CSB-PGBD3P0DP91 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 IQCB2P-201ENST00000401788 1633 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.112-201ENST00000363250 102 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.149-201ENST00000363558 117 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 MIR514A2-201ENST00000385131 88 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 MIR514A3-201ENST00000385132 88 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 RN7SKP27-201ENST00000410684 333 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-847P-201ENST00000411115 108 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 RPS20P1-201ENST00000434853 354 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 HMGB3P22-202ENST00000451823 572 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 SNORD121B-201ENST00000458838 81 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC091868.1-201ENST00000508746 304 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 FAM206BP-201ENST00000510179 541 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC026402.1-201ENST00000513642 170 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 RPL7P20-201ENST00000520308 745 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 SUMO2P20-201ENST00000520803 283 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AL161670.1-201ENST00000554348 137 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC073539.2-201ENST00000597113 165 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC022418.1-201ENST00000624118 445 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AC091925.2-201ENST00000625059 256 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AL596275.2-204ENST00000641628 552 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AL596275.2-206ENST00000641957 626 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 AP004289.2-201ENST00000444413 1457 ntBASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CSB-PGBD3P0DP91 SMG1P6-201ENST00000532337 2930 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AL442639.1-201ENST00000625030 1899 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RNU5A-8P-201ENST00000364102 114 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-26P-201ENST00000383985 107 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 Y_RNA.557-201ENST00000384680 107 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 SNORA48.4-201ENST00000391089 134 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RNA5SP397-201ENST00000391323 118 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RNA5SP241-201ENST00000391326 114 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RNU6-370P-201ENST00000411008 104 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 MTCYBP10-201ENST00000424905 650 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AL160004.2-201ENST00000432935 350 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RAC1P7-201ENST00000445367 377 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AL356010.1-201ENST00000456364 102 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 CEACAMP4-201ENST00000457676 421 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RNA5SP464-201ENST00000516251 108 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 SCARNA24.1-201ENST00000516465 137 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 IGKV2D-36-201ENST00000518643 226 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 RN7SL290P-201ENST00000578661 300 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AL451044.1-201ENST00000604867 238 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 AC010300.1-201ENST00000600671 5134 ntBASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CSB-PGBD3P0DP91 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms