Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A1P02462 AC084757.1-201ENST00000559987 490 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.27□□□□□ -2.05
COL4A1P02462 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.27□□□□□ -2.05
COL4A1P02462 ELOCP34-201ENST00000604436 327 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A1P02462 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A1P02462 CFTRP2-201ENST00000634304 199 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
COL4A1P02462 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
COL4A1P02462 Z82209.1-201ENST00000422141 2135 ntBASIC2.27□□□□□ -2.05
COL4A1P02462 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.27□□□□□ -2.05
COL4A1P02462 AC000367.1-201ENST00000452711 1766 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.26□□□□□ -2.05
COL4A1P02462 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.26□□□□□ -2.05
COL4A1P02462 UBE2V2P3-201ENST00000433562 437 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A1P02462 TVP23BP2-201ENST00000455082 615 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 AC021087.2-201ENST00000504656 1203 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.26□□□□□ -2.05
COL4A1P02462 EIF1AXP2-201ENST00000555940 413 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A1P02462 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A1P02462 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A1P02462 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.26□□□□□ -2.05
COL4A1P02462 AC092954.1-201ENST00000609121 445 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 AC034102.8-201ENST00000615146 484 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 WWP1P1-201ENST00000466609 2769 ntBASIC2.26□□□□□ -2.05
COL4A1P02462 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
COL4A1P02462 U8.9-201ENST00000365667 134 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC092832.1-201ENST00000422934 400 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC005517.2-201ENST00000424673 553 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 HMGB1P31-201ENST00000437242 427 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 USP9YP15-201ENST00000442391 422 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 HMGB3P21-201ENST00000452483 547 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 HMGB3P30-201ENST00000457863 606 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
COL4A1P02462 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.25□□□□□ -2.05
COL4A1P02462 RN7SKP34-201ENST00000516142 244 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 AC008676.3-201ENST00000521237 435 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 AC084033.1-201ENST00000550830 633 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC004241.3-201ENST00000611728 517 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 SEPT7P7-201ENST00000420492 1301 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 Y_RNA.355-201ENST00000365462 98 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 EIF1AXP1-201ENST00000419267 435 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 AC073310.1-201ENST00000423226 1033 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.25□□□□□ -2.05
COL4A1P02462 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.25□□□□□ -2.05
COL4A1P02462 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.25□□□□□ -2.05
COL4A1P02462 AC090453.1-201ENST00000495560 436 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 HMGB1P1-201ENST00000522557 636 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.25□□□□□ -2.05
COL4A1P02462 OR4U1P-201ENST00000554958 912 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.25□□□□□ -2.05
COL4A1P02462 MAGOH2P-202ENST00000584384 429 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 BNIP3P7-201ENST00000605641 516 ntBASIC2.25□□□□□ -2.05
COL4A1P02462 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A1P02462 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A1P02462 CKAP2P1-201ENST00000555477 2049 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.24□□□□□ -2.05
COL4A1P02462 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.24□□□□□ -2.05
COL4A1P02462 AC245517.4-201ENST00000448601 281 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 COX6CP5-201ENST00000527162 228 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 FAM106CP-201ENST00000582212 507 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 FAM60CP-201ENST00000591086 664 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 AP001542.1-201ENST00000591314 200 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 AC012213.4-201ENST00000606457 354 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 AC117490.2-201ENST00000610042 594 ntBASIC2.24□□□□□ -2.05
COL4A1P02462 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL4A1P02462 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A1P02462 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
COL4A1P02462 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.23□□□□□ -2.05
COL4A1P02462 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
COL4A1P02462 MIR7-2-201ENST00000384970 110 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 RNU2-17P-201ENST00000410290 190 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 AC093084.1-201ENST00000424233 687 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 AL157827.1-201ENST00000447622 132 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 HMGN1P8-201ENST00000463578 288 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.23□□□□□ -2.05
COL4A1P02462 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
COL4A1P02462 AC010265.1-201ENST00000513509 211 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 RNU6-1053P-201ENST00000515930 101 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.23□□□□□ -2.05
COL4A1P02462 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A1P02462 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.23□□□□□ -2.05
COL4A1P02462 AC048347.1-201ENST00000624621 427 ntBASIC2.23□□□□□ -2.05
COL4A1P02462 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms