Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 MIR5680-201ENST00000577577 84 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.4□□□□□ -1.71
NPHP1O15259 AC234772.3-201ENST00000602277 528 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AL022099.1-201ENST00000604551 712 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AC025588.2-201ENST00000604851 466 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 BRDTP1-201ENST00000605735 677 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.4□□□□□ -1.71
NPHP1O15259 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPHP1O15259 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
NPHP1O15259 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NPHP1O15259 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.39□□□□□ -1.71
NPHP1O15259 SNORD113-6-201ENST00000363345 75 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 SNORA4.1-201ENST00000364263 144 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 Y_RNA.234-201ENST00000364409 97 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 RNU6-882P-201ENST00000391025 103 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.39□□□□□ -1.71
NPHP1O15259 SSXP9-201ENST00000417503 292 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 MTCO2P21-201ENST00000419780 677 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 RABEPKP1-201ENST00000440529 1026 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.39□□□□□ -1.71
NPHP1O15259 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.39□□□□□ -1.71
NPHP1O15259 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.39□□□□□ -1.71
NPHP1O15259 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.39□□□□□ -1.71
NPHP1O15259 FCF1P8-201ENST00000510322 597 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 AC105914.1-201ENST00000511798 226 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.39□□□□□ -1.71
NPHP1O15259 RN7SKP209-201ENST00000516888 304 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 MRPS36P3-201ENST00000519284 130 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.39□□□□□ -1.71
NPHP1O15259 MIR4276-201ENST00000584832 70 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 AP001029.3-201ENST00000588063 596 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 BDH2P1-201ENST00000602288 736 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 AL596327.1-201ENST00000603629 213 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 YPEL5P2-201ENST00000605553 359 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.39□□□□□ -1.71
NPHP1O15259 AC011330.2-201ENST00000621680 635 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 AC095031.1-201ENST00000623685 672 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NPHP1O15259 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NPHP1O15259 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
NPHP1O15259 AP001148.1-201ENST00000624124 2359 ntBASIC4.39□□□□□ -1.71
NPHP1O15259 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.38□□□□□ -1.71
NPHP1O15259 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
NPHP1O15259 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.38□□□□□ -1.71
NPHP1O15259 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NPHP1O15259 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NPHP1O15259 SNORD6-201ENST00000365444 73 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 Y_RNA.548-201ENST00000384656 105 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 AL136372.1-201ENST00000403060 228 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 YPEL5P1-201ENST00000419731 367 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AL159169.1-201ENST00000421119 127 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 NDUFB1P1-201ENST00000435191 180 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 ANKRD26P4-201ENST00000455755 950 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AC023598.1-201ENST00000472521 361 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.38□□□□□ -1.71
NPHP1O15259 RN7SL504P-201ENST00000494496 287 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AC093663.1-201ENST00000497190 394 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 TXNP6-201ENST00000510190 310 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.38□□□□□ -1.71
NPHP1O15259 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.38□□□□□ -1.71
NPHP1O15259 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.38□□□□□ -1.71
NPHP1O15259 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.38□□□□□ -1.71
NPHP1O15259 OR4K8P-201ENST00000578842 1048 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.38□□□□□ -1.71
NPHP1O15259 MIR4298-201ENST00000584380 73 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AL353997.4-201ENST00000586196 166 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.38□□□□□ -1.71
NPHP1O15259 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.38□□□□□ -1.71
NPHP1O15259 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.38□□□□□ -1.71
NPHP1O15259 AC006254.3-201ENST00000603353 884 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 TUG1_1.1-201ENST00000610654 145 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AL136981.2-201ENST00000617319 734 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 AC079228.1-201ENST00000624774 1049 ntBASIC4.38□□□□□ -1.71
NPHP1O15259 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.38□□□□□ -1.71
NPHP1O15259 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NPHP1O15259 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NPHP1O15259 TAB3P1-202ENST00000452645 1634 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
NPHP1O15259 PIGPP2-201ENST00000411569 458 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.37□□□□□ -1.71
NPHP1O15259 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.37□□□□□ -1.71
NPHP1O15259 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.37□□□□□ -1.71
NPHP1O15259 AC004866.2-201ENST00000438285 481 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 SNRPEP7-201ENST00000438350 220 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 CFTRP1-201ENST00000456646 183 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.37□□□□□ -1.71
NPHP1O15259 snoU13.8-201ENST00000458890 104 ntBASIC4.37□□□□□ -1.71
NPHP1O15259 RN7SL93P-201ENST00000463035 293 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms