Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC093648.1-201ENST00000623546 606 ntBASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC055839.1-201ENST00000634467 498 ntBASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC108751.5-201ENST00000492880 1336 ntBASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
IGHV4-28A0A0C4DH34 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 MFSD8-216ENST00000641147 4009 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNORA62.1-201ENST00000364287 154 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNORA23-201ENST00000365128 182 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU4-48P-201ENST00000365559 182 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU2-39P-201ENST00000410604 198 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 RNU6-1068P-201ENST00000410958 103 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 OR9R1P-201ENST00000412200 877 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 OR51A5P-201ENST00000415429 942 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC068287.1-201ENST00000430283 295 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 HMGB3P9-201ENST00000441799 583 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 DDX3P2-201ENST00000446138 111 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL671855.1-201ENST00000446875 1203 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL356010.1-201ENST00000456364 102 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 snoU13.1-201ENST00000459157 104 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNORD97-201ENST00000459187 142 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC010631.1-201ENST00000474150 156 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC126389.1-201ENST00000477436 290 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC116562.3-201ENST00000506136 177 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC002456.2-201ENST00000509356 380 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 PCBP2P3-201ENST00000509726 843 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC025465.4-201ENST00000513422 638 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNORA20.3-201ENST00000516880 132 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008489.1-201ENST00000524271 483 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC068587.5-201ENST00000528506 175 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC103843.2-201ENST00000530523 682 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP001781.1-201ENST00000530977 207 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC105129.1-201ENST00000560250 297 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC209154.1-201ENST00000582156 337 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC069061.3-201ENST00000582254 823 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC005730.3-201ENST00000583067 366 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AP001029.3-201ENST00000588063 596 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008745.1-201ENST00000604064 271 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AL035413.2-201ENST00000604801 525 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC008945.2-201ENST00000606056 604 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNORD91B-202ENST00000608459 222 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 RMST_3.1-201ENST00000611651 109 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SNHG22-203ENST00000617833 660 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC015967.1-201ENST00000619893 476 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 AC006020.1-201ENST00000420179 1854 ntBASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.34□□□□□ -1.87
IGHV4-28A0A0C4DH34 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
IGHV4-28A0A0C4DH34 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.34□□□□□ -1.88
IGHV4-28A0A0C4DH34 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
IGHV4-28A0A0C4DH34 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
IGHV4-28A0A0C4DH34 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.34□□□□□ -1.88
IGHV4-28A0A0C4DH34 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL391684.1-202ENST00000641293 1636 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL356489.2-201ENST00000566968 3528 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC090337.1-201ENST00000579651 2074 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC073343.1-201ENST00000328239 651 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 Y_RNA.160-201ENST00000363677 92 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-1284P-201ENST00000363701 100 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 RNU6-996P-201ENST00000365438 107 ntBASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL356776.1-201ENST00000406574 447 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms