Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 TMEM132D-AS1-207ENST00000542535 442 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 EEF1B2P1-201ENST00000567221 672 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC024940.4-201ENST00000605507 246 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC091932.3-201ENST00000624223 323 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AC116667.2-201ENST00000641075 823 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 DDX10P2-201ENST00000417796 2614 ntBASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.16□□□□□ -1.1
FOXD4L1Q9NU39 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 TINAG-203ENST00000370869 782 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 MIR153-1-201ENST00000384914 90 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC073900.1-201ENST00000429766 776 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 RN7SL306P-201ENST00000492941 296 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC063943.2-201ENST00000495697 534 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AP004242.1-201ENST00000533701 349 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 MIR4301-201ENST00000577203 66 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC067852.5-201ENST00000589299 310 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AL589765.5-201ENST00000596133 515 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 MIR6807-201ENST00000621968 92 ntBASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
FOXD4L1Q9NU39 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC8.15□□□□□ -1.11
FOXD4L1Q9NU39 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
FOXD4L1Q9NU39 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
FOXD4L1Q9NU39 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 Y_RNA.309-201ENST00000365046 111 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RNU6-1310P-201ENST00000384153 107 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 MIR541-201ENST00000401360 84 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RN7SKP148-201ENST00000410179 275 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 NDUFB4P7-201ENST00000423198 363 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RPL23AP95-201ENST00000426806 265 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RPS27AP3-201ENST00000453803 454 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RN7SL775P-201ENST00000498361 336 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RNA5SP54-201ENST00000516951 92 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC021269.2-201ENST00000532318 330 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 RN7SL42P-201ENST00000579786 294 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC120057.5-201ENST00000623840 154 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 SNORA43.4-201ENST00000629559 138 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 PSMD5-AS1-215ENST00000640622 205 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC093535.2-201ENST00000624769 2326 ntBASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC8.14□□□□□ -1.11
FOXD4L1Q9NU39 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
FOXD4L1Q9NU39 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms