Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC233728.2-201ENST00000425348 757 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC091179.1-201ENST00000461606 579 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 HMGB1P25-201ENST00000468402 607 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC011825.1-201ENST00000484967 388 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RNU6-27P-201ENST00000516146 107 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 OR4P1P-201ENST00000530808 1136 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC120349.2-201ENST00000625002 298 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 U6.101-201ENST00000637707 76 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 LINC02211-204ENST00000642024 1070 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 AC109315.1-201ENST00000584143 1347 ntBASIC3.39□□□□□ -1.87
HPS4Q9NQG7 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HPS4Q9NQG7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 RNU1-70P-201ENST00000362618 164 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 SNRPEP2-201ENST00000397592 279 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 NANOGP2-201ENST00000435391 727 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 MTCYBP11-201ENST00000447254 1109 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 EXOSC3P1-201ENST00000448649 500 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 RPL36AP33-201ENST00000450395 310 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AL445669.2-201ENST00000454425 421 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AP002884.2-201ENST00000471647 395 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 SNORA70.19-201ENST00000516717 90 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 EEF1B2P4-201ENST00000551398 348 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC087481.2-201ENST00000565492 330 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC015688.2-201ENST00000584523 262 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AL451007.1-201ENST00000595491 289 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AP000240.1-201ENST00000609910 452 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC138932.5-201ENST00000617759 563 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AL356321.1-201ENST00000621360 228 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC091925.2-201ENST00000625059 256 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 MAPK10-322ENST00000641485 4530 ntBASIC3.38□□□□□ -1.87
HPS4Q9NQG7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
HPS4Q9NQG7 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 ZNF807-201ENST00000328088 1707 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 SNRPEP3-201ENST00000338402 276 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 Y_RNA.408-201ENST00000383987 102 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AL591034.1-201ENST00000407447 340 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 RNU6-712P-201ENST00000410558 100 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 RNA5SP31-201ENST00000411144 127 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AL831737.1-201ENST00000441288 271 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 RPL17P49-201ENST00000443728 411 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 RPS3AP14-201ENST00000483907 780 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC068724.1-201ENST00000487100 792 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.37□□□□□ -1.87
HPS4Q9NQG7 MTND4LP22-201ENST00000508209 276 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC026412.2-201ENST00000512270 1075 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 FABP5P12-201ENST00000515543 389 ntBASIC3.37□□□□□ -1.87
HPS4Q9NQG7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms