Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AP001330.4-201ENST00000604350 154 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL022099.1-201ENST00000604551 712 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC012443.1-201ENST00000605605 231 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 RNU6-88P-201ENST00000606801 100 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFT1Q96AA3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RFT1Q96AA3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
RFT1Q96AA3 AC092447.10-201ENST00000620607 1652 ntBASIC3.24□□□□□ -1.89
RFT1Q96AA3 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AL391994.1-201ENST00000254724 282 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNU1-75P-201ENST00000347264 129 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNU6-777P-201ENST00000364265 104 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNA5SP317-201ENST00000410176 116 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RN7SKP266-201ENST00000410232 287 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNU2-43P-201ENST00000410306 190 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNA5SP311-201ENST00000411290 116 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 SSXP9-201ENST00000417503 292 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AL035407.1-201ENST00000429211 571 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 BX679664.1-201ENST00000434429 253 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC010655.1-201ENST00000449336 292 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC104308.1-201ENST00000454621 333 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC099563.1-201ENST00000456086 418 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 HMGB1P36-201ENST00000487709 576 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC093809.1-201ENST00000509155 340 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNA5SP315-201ENST00000516340 116 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNU6-352P-201ENST00000516908 107 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 RNA5SP312-201ENST00000517068 116 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFT1Q96AA3 MED28P6-201ENST00000558776 231 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC002400.1-201ENST00000569310 726 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 OR4K8P-201ENST00000578842 1048 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC024560.3-201ENST00000608482 349 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 MIR6716-201ENST00000613413 80 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AL110115.1-201ENST00000614396 364 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 AL590099.1-201ENST00000615276 138 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 AC007490.1-201ENST00000624321 703 ntBASIC3.23□□□□□ -1.89
RFT1Q96AA3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
RFT1Q96AA3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.23□□□□□ -1.89
RFT1Q96AA3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFT1Q96AA3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL513302.2-201ENST00000562313 1842 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC009812.4-201ENST00000569134 1805 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RFT1Q96AA3 RPL7P26-201ENST00000333817 754 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 MIR372-201ENST00000362225 67 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RNU6-173P-201ENST00000364215 104 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RNU6-744P-201ENST00000365557 107 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RNU6-1316P-201ENST00000384242 108 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 SNORA70C-201ENST00000384538 135 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL049545.1-201ENST00000401856 572 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RNU4-65P-201ENST00000410473 140 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL807761.1-201ENST00000417622 171 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 HMGB3P20-201ENST00000417997 600 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC016907.1-201ENST00000419483 435 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 RPL21P32-201ENST00000419877 477 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL022400.1-201ENST00000423946 935 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 DPPA2P1-201ENST00000428060 556 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL121871.1-201ENST00000443413 436 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AL606662.1-201ENST00000445763 553 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 AC006480.1-201ENST00000449887 378 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 SSXP4-201ENST00000451349 245 ntBASIC3.22□□□□□ -1.89
RFT1Q96AA3 ART2BP-201ENST00000453501 499 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms