Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 MTCO3P12-201ENST00000416718 547 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 RPL23AP1-201ENST00000428990 471 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 SAR1AP4-201ENST00000429225 591 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 AC005534.2-201ENST00000431047 433 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF1Q92994 ATP5JP1-201ENST00000431631 322 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 TIMM9P1-201ENST00000436122 256 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF1Q92994 AC104308.1-201ENST00000454621 333 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF1Q92994 AC021146.1-201ENST00000511202 716 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF1Q92994 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF1Q92994 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF1Q92994 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.2□□□□□ -1.58
BRF1Q92994 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 RPL23AP97-201ENST00000568955 471 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.2□□□□□ -1.58
BRF1Q92994 MTCO3P13-201ENST00000577757 781 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 AC105429.2-201ENST00000610567 517 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BRF1Q92994 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF1Q92994 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BRF1Q92994 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF1Q92994 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
BRF1Q92994 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.2□□□□□ -1.58
BRF1Q92994 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BRF1Q92994 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.2□□□□□ -1.58
BRF1Q92994 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF1Q92994 RNU6-398P-201ENST00000384143 109 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 RNU6-510P-201ENST00000391239 108 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AL122016.1-201ENST00000403365 367 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 RNA5SP146-201ENST00000410743 123 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AL354751.2-201ENST00000415471 210 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AC127526.1-201ENST00000417526 366 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 PDSS1P1-201ENST00000422953 1114 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF1Q92994 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF1Q92994 MTND6P18-201ENST00000439477 513 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 NANOGP10-201ENST00000453325 895 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AC053481.1-201ENST00000467217 306 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AL163973.1-201ENST00000484753 577 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 HSPD1P15-201ENST00000505573 1122 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.19□□□□□ -1.58
BRF1Q92994 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF1Q92994 AC024224.1-201ENST00000538284 609 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 HPRT1P3-201ENST00000539521 576 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.19□□□□□ -1.58
BRF1Q92994 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.19□□□□□ -1.58
BRF1Q92994 AC018552.3-201ENST00000567416 561 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.19□□□□□ -1.58
BRF1Q92994 RN7SL52P-201ENST00000584271 284 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 uc_338.5-201ENST00000611839 155 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 USP12-203ENST00000620323 349 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 AP005019.3-201ENST00000620418 560 ntBASIC5.19□□□□□ -1.58
BRF1Q92994 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.19□□□□□ -1.58
BRF1Q92994 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF1Q92994 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.19□□□□□ -1.58
BRF1Q92994 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
BRF1Q92994 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF1Q92994 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF1Q92994 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF1Q92994 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
BRF1Q92994 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
BRF1Q92994 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
BRF1Q92994 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRF1Q92994 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
BRF1Q92994 Z95327.2-201ENST00000414579 1873 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.18□□□□□ -1.58
BRF1Q92994 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
BRF1Q92994 NACAP2-201ENST00000318548 624 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 RNU6-996P-201ENST00000365438 107 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 RNA5SP332-201ENST00000391063 115 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AL591416.1-201ENST00000404015 867 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 TMSB10P2-201ENST00000416049 131 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AC119751.6-201ENST00000416712 186 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 USP9YP20-201ENST00000419224 558 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 NCOR1P3-201ENST00000420479 303 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AF228730.4-201ENST00000421457 183 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 DHFRP3-201ENST00000455595 559 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.18□□□□□ -1.58
BRF1Q92994 AC078785.3-201ENST00000476607 425 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
BRF1Q92994 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.18□□□□□ -1.58
BRF1Q92994 SNORD27.1-201ENST00000516319 72 ntBASIC5.18□□□□□ -1.58
BRF1Q92994 RNU7-30P-201ENST00000516835 62 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms