Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC021146.4-201ENST00000309229 279 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 RNU5E-8P-201ENST00000363502 116 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.231-201ENST00000364358 102 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 Y_RNA.387-201ENST00000383918 102 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 E2F6P2-201ENST00000420708 748 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 MTCYBP8-201ENST00000422855 651 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 SALL4P2-201ENST00000423288 2910 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 RPS12P10-201ENST00000427031 377 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 RPS29P17-201ENST00000430795 166 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC073415.1-201ENST00000449240 153 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AL049714.1-201ENST00000466686 347 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 HSPD1P15-201ENST00000505573 1122 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 MIR2116-201ENST00000517221 80 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC025884.1-201ENST00000556034 378 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AC105224.1-201ENST00000587055 421 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 UBE2L4-201ENST00000587688 464 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 C2orf27A-204ENST00000623058 969 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 AL445437.1-201ENST00000623157 3087 ntBASIC5.78□□□□□ -1.48
PRPF40BQ6NWY9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 SOCS5P3-201ENST00000425115 1576 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 OR1S2-201ENST00000302592 978 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 RNY3P13-201ENST00000365542 102 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 Y_RNA.367-201ENST00000365544 101 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 RNU4-26P-201ENST00000410270 107 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-1148P-201ENST00000410992 104 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC099336.2-201ENST00000422457 254 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 ERLEC1P1-201ENST00000433806 578 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 OR4C10P-201ENST00000434991 931 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 TIMM9P1-201ENST00000436122 256 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC099560.2-201ENST00000457554 255 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 SNORA84-201ENST00000459229 133 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 GMFBP1-201ENST00000467831 427 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC020593.1-201ENST00000507399 299 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC011979.2-201ENST00000527568 352 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AP001029.3-201ENST00000588063 596 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 GLUD1P4-201ENST00000590914 418 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AL596245.1-201ENST00000618994 362 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC015871.5-202ENST00000623252 701 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC104260.2-201ENST00000623551 3497 ntBASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF40BQ6NWY9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 SNORD82-201ENST00000365530 70 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 U3.35-201ENST00000408405 208 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RNU2-62P-201ENST00000410868 191 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-603P-201ENST00000411403 107 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RPS7P15-201ENST00000415804 584 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AL451054.2-201ENST00000420896 202 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AL451139.1-201ENST00000434718 346 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 MTND3P16-201ENST00000452205 344 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-329P-201ENST00000459618 107 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AP001992.1-205ENST00000462248 379 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RN7SL810P-201ENST00000493031 276 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 FTH1P24-201ENST00000503502 462 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RFPL4AP5-201ENST00000514977 504 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 AC093853.1-201ENST00000515689 483 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RNU6-1170P-201ENST00000515974 106 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 Y_RNA.691-201ENST00000516611 103 ntBASIC5.76□□□□□ -1.49
PRPF40BQ6NWY9 RN7SKP256-201ENST00000517201 314 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms