Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR208A-201ENST00000362287 71 ntBASIC2.97□□□□□ -1.93
LIM2P55344 Y_RNA.311-201ENST00000365068 96 ntBASIC2.97□□□□□ -1.93
LIM2P55344 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.97□□□□□ -1.93
LIM2P55344 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LIM2P55344 SNORA7.4-201ENST00000384249 137 ntBASIC2.97□□□□□ -1.93
LIM2P55344 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
LIM2P55344 RPL21P3-201ENST00000395517 478 ntBASIC2.97□□□□□ -1.93
LIM2P55344 ANAPC10P1-201ENST00000395991 556 ntBASIC2.97□□□□□ -1.93
LIM2P55344 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.97□□□□□ -1.93
LIM2P55344 RPL21P66-201ENST00000426566 466 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC108734.1-201ENST00000439549 399 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC104978.1-201ENST00000449387 391 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AL009048.1-201ENST00000450437 298 ntBASIC2.97□□□□□ -1.93
LIM2P55344 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AL136097.1-201ENST00000456945 913 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC146507.2-201ENST00000460608 476 ntBASIC2.97□□□□□ -1.93
LIM2P55344 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.97□□□□□ -1.93
LIM2P55344 RN7SL504P-201ENST00000494496 287 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.97□□□□□ -1.93
LIM2P55344 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.97□□□□□ -1.93
LIM2P55344 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.97□□□□□ -1.93
LIM2P55344 AC006499.2-201ENST00000513470 337 ntBASIC2.97□□□□□ -1.93
LIM2P55344 RNU6-1073P-201ENST00000517182 106 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.97□□□□□ -1.93
LIM2P55344 SETP7-201ENST00000552169 453 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.97□□□□□ -1.93
LIM2P55344 AL049838.1-201ENST00000563647 981 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC023813.2-201ENST00000564321 469 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.97□□□□□ -1.93
LIM2P55344 MIR5004-201ENST00000579078 107 ntBASIC2.97□□□□□ -1.93
LIM2P55344 PRELID3BP8-201ENST00000604148 295 ntBASIC2.97□□□□□ -1.93
LIM2P55344 YPEL5P2-201ENST00000605553 359 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC096577.2-201ENST00000611455 153 ntBASIC2.97□□□□□ -1.93
LIM2P55344 AC004009.2-201ENST00000623016 728 ntBASIC2.97□□□□□ -1.93
LIM2P55344 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LIM2P55344 AC002546.1-201ENST00000588041 2504 ntBASIC2.97□□□□□ -1.93
LIM2P55344 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.97□□□□□ -1.93
LIM2P55344 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.97□□□□□ -1.93
LIM2P55344 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.97□□□□□ -1.93
LIM2P55344 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LIM2P55344 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
LIM2P55344 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
LIM2P55344 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
LIM2P55344 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 ZNF29P-201ENST00000225587 168 ntBASIC2.96□□□□□ -1.94
LIM2P55344 SNORA38.1-201ENST00000364172 131 ntBASIC2.96□□□□□ -1.94
LIM2P55344 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.96□□□□□ -1.94
LIM2P55344 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.96□□□□□ -1.94
LIM2P55344 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 AC019178.2-201ENST00000423595 505 ntBASIC2.96□□□□□ -1.94
LIM2P55344 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 PSMA6P3-201ENST00000428242 164 ntBASIC2.96□□□□□ -1.94
LIM2P55344 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.96□□□□□ -1.94
LIM2P55344 RPL21P134-201ENST00000453468 483 ntBASIC2.96□□□□□ -1.94
LIM2P55344 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.96□□□□□ -1.94
LIM2P55344 SNORD11.1-201ENST00000459482 85 ntBASIC2.96□□□□□ -1.94
LIM2P55344 RPS4XP13-201ENST00000483219 789 ntBASIC2.96□□□□□ -1.94
LIM2P55344 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.96□□□□□ -1.94
LIM2P55344 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.96□□□□□ -1.94
LIM2P55344 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.96□□□□□ -1.94
LIM2P55344 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.96□□□□□ -1.94
LIM2P55344 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 NBEAP1-201ENST00000554452 979 ntBASIC2.96□□□□□ -1.94
LIM2P55344 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.96□□□□□ -1.94
LIM2P55344 UBL5P2-201ENST00000583788 219 ntBASIC2.96□□□□□ -1.94
LIM2P55344 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.96□□□□□ -1.94
LIM2P55344 AL360181.4-201ENST00000621752 134 ntBASIC2.96□□□□□ -1.94
LIM2P55344 AC026422.1-201ENST00000623961 452 ntBASIC2.96□□□□□ -1.94
LIM2P55344 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.96□□□□□ -1.94
LIM2P55344 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 DDX43P2-201ENST00000604753 1354 ntBASIC2.96□□□□□ -1.94
LIM2P55344 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.96□□□□□ -1.94
LIM2P55344 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.96□□□□□ -1.94
LIM2P55344 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIM2P55344 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.96□□□□□ -1.94
LIM2P55344 AC093831.2-201ENST00000624393 3427 ntBASIC2.95□□□□□ -1.94
LIM2P55344 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 AC118273.1-201ENST00000525324 3006 ntBASIC2.95□□□□□ -1.94
LIM2P55344 Y_RNA.192-201ENST00000363977 102 ntBASIC2.95□□□□□ -1.94
LIM2P55344 SNORD116.1-201ENST00000365628 92 ntBASIC2.95□□□□□ -1.94
LIM2P55344 SNORA46-201ENST00000384762 135 ntBASIC2.95□□□□□ -1.94
LIM2P55344 ELOCP9-201ENST00000418624 239 ntBASIC2.95□□□□□ -1.94
LIM2P55344 HMGB1P49-201ENST00000418882 569 ntBASIC2.95□□□□□ -1.94
LIM2P55344 MTCO2P5-201ENST00000422621 426 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.95□□□□□ -1.94
LIM2P55344 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.95□□□□□ -1.94
LIM2P55344 MTND4LP10-201ENST00000435146 291 ntBASIC2.95□□□□□ -1.94
LIM2P55344 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LIM2P55344 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.95□□□□□ -1.94
LIM2P55344 USP9YP10-201ENST00000454868 628 ntBASIC2.95□□□□□ -1.94
LIM2P55344 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms