Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RPS3AP17-201ENST00000472594 777 ntBASIC3.72□□□□□ -1.81
CDH12P55289 RN7SL481P-201ENST00000477764 299 ntBASIC3.72□□□□□ -1.81
CDH12P55289 RN7SL271P-201ENST00000487601 295 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC146944.2-203ENST00000502493 354 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CDH12P55289 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 AC093840.1-201ENST00000511599 336 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC139495.1-202ENST00000513164 354 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH12P55289 AC022483.1-201ENST00000514020 567 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH12P55289 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 AC025627.2-201ENST00000576220 160 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.72□□□□□ -1.81
CDH12P55289 MIR4330-201ENST00000579077 105 ntBASIC3.72□□□□□ -1.81
CDH12P55289 MIR3682-201ENST00000581338 84 ntBASIC3.72□□□□□ -1.81
CDH12P55289 MIR3118-1-201ENST00000581787 76 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC060771.1-201ENST00000582031 164 ntBASIC3.72□□□□□ -1.81
CDH12P55289 MIR5684-201ENST00000585074 65 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC008745.1-201ENST00000604064 271 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AL022154.1-201ENST00000604698 785 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH12P55289 AL590099.1-201ENST00000615276 138 ntBASIC3.72□□□□□ -1.81
CDH12P55289 U6atac.1-201ENST00000616025 117 ntBASIC3.72□□□□□ -1.81
CDH12P55289 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH12P55289 AC072046.2-201ENST00000618366 268 ntBASIC3.72□□□□□ -1.81
CDH12P55289 AL732618.1-201ENST00000623251 301 ntBASIC3.72□□□□□ -1.81
CDH12P55289 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CDH12P55289 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.72□□□□□ -1.81
CDH12P55289 FAM35DP-201ENST00000323387 2712 ntBASIC3.72□□□□□ -1.81
CDH12P55289 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH12P55289 NMD3P1-201ENST00000439704 1488 ntBASIC3.72□□□□□ -1.81
CDH12P55289 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
CDH12P55289 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.72□□□□□ -1.81
CDH12P55289 UBE3AP2-201ENST00000429033 2259 ntBASIC3.72□□□□□ -1.81
CDH12P55289 MTCO1P24-201ENST00000515438 1558 ntBASIC3.72□□□□□ -1.81
CDH12P55289 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CDH12P55289 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.81
CDH12P55289 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
CDH12P55289 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH12P55289 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CDH12P55289 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 U3.20-201ENST00000390909 217 ntBASIC3.71□□□□□ -1.82
CDH12P55289 RNU6-821P-201ENST00000390995 107 ntBASIC3.71□□□□□ -1.82
CDH12P55289 MIR1250-201ENST00000408098 113 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC092447.6-201ENST00000414578 210 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH12P55289 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 DNAJC19P7-201ENST00000428811 344 ntBASIC3.71□□□□□ -1.82
CDH12P55289 RPS27AP12-201ENST00000429552 465 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CDH12P55289 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH12P55289 AC112653.1-201ENST00000443851 386 ntBASIC3.71□□□□□ -1.82
CDH12P55289 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AL500522.2-201ENST00000448562 343 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 SNORD121B-201ENST00000458838 81 ntBASIC3.71□□□□□ -1.82
CDH12P55289 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AC126182.1-201ENST00000478134 357 ntBASIC3.71□□□□□ -1.82
CDH12P55289 RPL21P103-201ENST00000479921 488 ntBASIC3.71□□□□□ -1.82
CDH12P55289 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 AC055855.1-201ENST00000489563 579 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.71□□□□□ -1.82
CDH12P55289 BTF3L4P4-201ENST00000506381 449 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC108078.1-201ENST00000508073 725 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC011352.1-201ENST00000512300 793 ntBASIC3.71□□□□□ -1.82
CDH12P55289 NPM1P41-201ENST00000512920 831 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC017037.2-201ENST00000513850 890 ntBASIC3.71□□□□□ -1.82
CDH12P55289 RN7SKP116-201ENST00000516902 319 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH12P55289 DEFB108A-201ENST00000530110 222 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AP003385.6-201ENST00000531603 374 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.71□□□□□ -1.82
CDH12P55289 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CDH12P55289 AC135001.1-201ENST00000544546 283 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 SETP7-201ENST00000552169 453 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AC087481.2-201ENST00000565492 330 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC107954.1-201ENST00000565906 727 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AL356432.3-201ENST00000568952 465 ntBASIC3.71□□□□□ -1.82
CDH12P55289 MIR4277-201ENST00000578298 84 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 VN1R79P-201ENST00000593540 513 ntBASIC3.71□□□□□ -1.82
CDH12P55289 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.71□□□□□ -1.82
CDH12P55289 DUXAP4-201ENST00000603046 613 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AL355812.1-201ENST00000603215 216 ntBASIC3.71□□□□□ -1.82
CDH12P55289 AC011468.4-201ENST00000603942 409 ntBASIC3.71□□□□□ -1.82
CDH12P55289 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.71□□□□□ -1.82
CDH12P55289 AC004825.2-201ENST00000616634 455 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms