Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 Y_RNA.576-201ENST00000384781 102 ntBASIC5.04□□□□□ -1.6
CCNFP41002 MIR606-201ENST00000384851 96 ntBASIC5.04□□□□□ -1.6
CCNFP41002 MIR548P-201ENST00000408336 84 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC092447.6-201ENST00000414578 210 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AL355433.1-201ENST00000422804 300 ntBASIC5.04□□□□□ -1.6
CCNFP41002 CKS1BP6-201ENST00000424932 240 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AL450023.3-201ENST00000440592 271 ntBASIC5.04□□□□□ -1.6
CCNFP41002 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNFP41002 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNFP41002 CEACAMP6-201ENST00000452007 574 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AL691482.1-201ENST00000453255 87 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC007967.1-201ENST00000455422 1159 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AL445433.1-201ENST00000457507 257 ntBASIC5.04□□□□□ -1.6
CCNFP41002 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 Y_RNA.635-201ENST00000459041 101 ntBASIC5.04□□□□□ -1.6
CCNFP41002 RPS26P39-201ENST00000469206 341 ntBASIC5.04□□□□□ -1.6
CCNFP41002 VN1R17P-201ENST00000472048 1090 ntBASIC5.04□□□□□ -1.6
CCNFP41002 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNFP41002 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 AC027575.1-201ENST00000481064 460 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC090686.1-201ENST00000481577 749 ntBASIC5.04□□□□□ -1.6
CCNFP41002 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNFP41002 AC072052.1-201ENST00000496556 306 ntBASIC5.04□□□□□ -1.6
CCNFP41002 MTND5P5-201ENST00000503764 376 ntBASIC5.04□□□□□ -1.6
CCNFP41002 SNRPCP2-201ENST00000504370 475 ntBASIC5.04□□□□□ -1.6
CCNFP41002 HIGD1AP14-201ENST00000507617 282 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 RNA5SP249-201ENST00000516127 99 ntBASIC5.04□□□□□ -1.6
CCNFP41002 HMGB1P19-201ENST00000517578 577 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.04□□□□□ -1.6
CCNFP41002 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.04□□□□□ -1.6
CCNFP41002 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 CYCSP40-201ENST00000575927 294 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 MIR1269B-201ENST00000580405 75 ntBASIC5.04□□□□□ -1.6
CCNFP41002 MIR3942-201ENST00000585264 109 ntBASIC5.04□□□□□ -1.6
CCNFP41002 POLR3GP2-201ENST00000588366 668 ntBASIC5.04□□□□□ -1.6
CCNFP41002 OR7E18P-201ENST00000592589 702 ntBASIC5.04□□□□□ -1.6
CCNFP41002 APOOP1-201ENST00000604695 592 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AP000942.4-201ENST00000604811 241 ntBASIC5.04□□□□□ -1.6
CCNFP41002 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCNFP41002 MIR6798-201ENST00000612887 67 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AL512624.1-201ENST00000613638 469 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC040896.1-201ENST00000613819 479 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.04□□□□□ -1.6
CCNFP41002 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNFP41002 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNFP41002 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCNFP41002 AC000123.3-201ENST00000624029 4975 ntBASIC5.04□□□□□ -1.6
CCNFP41002 AC026951.1-201ENST00000559530 2459 ntBASIC5.04□□□□□ -1.6
CCNFP41002 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CCNFP41002 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCNFP41002 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.04□□□□□ -1.6
CCNFP41002 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCNFP41002 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
CCNFP41002 BTBD10P1-201ENST00000549824 1352 ntBASIC5.04□□□□□ -1.6
CCNFP41002 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNFP41002 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 NEAT1-202ENST00000501122 22743 ntBASIC5.03□□□□□ -1.6
CCNFP41002 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 API5P2-201ENST00000397055 1498 ntBASIC5.03□□□□□ -1.6
CCNFP41002 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCNFP41002 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNFP41002 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNFP41002 AL139276.1-201ENST00000311910 1001 ntBASIC5.03□□□□□ -1.6
CCNFP41002 Y_RNA.301-201ENST00000364990 103 ntBASIC5.03□□□□□ -1.6
CCNFP41002 RPS4XP9-201ENST00000405151 780 ntBASIC5.03□□□□□ -1.6
CCNFP41002 RNU4-78P-201ENST00000410940 126 ntBASIC5.03□□□□□ -1.6
CCNFP41002 RN7SKP126-201ENST00000411143 300 ntBASIC5.03□□□□□ -1.6
CCNFP41002 RPL21P24-201ENST00000413752 448 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNFP41002 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNFP41002 BX323845.1-201ENST00000432417 179 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNFP41002 AL163193.1-201ENST00000444895 788 ntBASIC5.03□□□□□ -1.6
CCNFP41002 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNFP41002 SNORD97-201ENST00000459187 142 ntBASIC5.03□□□□□ -1.6
CCNFP41002 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNFP41002 BTF3P13-201ENST00000513224 490 ntBASIC5.03□□□□□ -1.6
CCNFP41002 RNA5SP34-201ENST00000516887 130 ntBASIC5.03□□□□□ -1.6
CCNFP41002 RN7SKP260-201ENST00000516907 149 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.03□□□□□ -1.6
CCNFP41002 IGLV2-28-201ENST00000520681 304 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AP001804.3-201ENST00000525146 880 ntBASIC5.03□□□□□ -1.6
CCNFP41002 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.03□□□□□ -1.6
CCNFP41002 MIR4293-201ENST00000584305 78 ntBASIC5.03□□□□□ -1.6
CCNFP41002 MIR4424-201ENST00000585257 86 ntBASIC5.03□□□□□ -1.6
CCNFP41002 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.03□□□□□ -1.6
CCNFP41002 AC245389.1-201ENST00000605141 529 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AC010680.4-201ENST00000605334 543 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AC080078.3-201ENST00000605407 463 ntBASIC5.03□□□□□ -1.6
CCNFP41002 AL627309.6-201ENST00000606857 840 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms