Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.18□□□□□ -1.74
CIITAP33076 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.18□□□□□ -1.74
CIITAP33076 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.18□□□□□ -1.74
CIITAP33076 AP001094.1-201ENST00000579805 193 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.18□□□□□ -1.74
CIITAP33076 AC090616.5-202ENST00000582111 297 ntBASIC4.18□□□□□ -1.74
CIITAP33076 MIR4637-201ENST00000582405 84 ntBASIC4.18□□□□□ -1.74
CIITAP33076 OR4G1P-201ENST00000588632 938 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.18□□□□□ -1.74
CIITAP33076 BRDTP1-201ENST00000605735 677 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AC087241.4-201ENST00000612441 480 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AC006133.1-201ENST00000617106 264 ntBASIC4.18□□□□□ -1.74
CIITAP33076 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CIITAP33076 C2orf27A-204ENST00000623058 969 ntBASIC4.18□□□□□ -1.74
CIITAP33076 AC091905.1-201ENST00000624400 311 ntBASIC4.18□□□□□ -1.74
CIITAP33076 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.18□□□□□ -1.74
CIITAP33076 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.18□□□□□ -1.74
CIITAP33076 AP000553.6-201ENST00000641242 118 ntBASIC4.18□□□□□ -1.74
CIITAP33076 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CIITAP33076 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CIITAP33076 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CIITAP33076 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CIITAP33076 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
CIITAP33076 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.17□□□□□ -1.74
CIITAP33076 PTMAP2-201ENST00000397627 327 ntBASIC4.17□□□□□ -1.74
CIITAP33076 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 DHFRP6-201ENST00000401776 268 ntBASIC4.17□□□□□ -1.74
CIITAP33076 HMGB1P17-201ENST00000403495 628 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AL023807.1-201ENST00000407932 359 ntBASIC4.17□□□□□ -1.74
CIITAP33076 RNU2-66P-201ENST00000410650 161 ntBASIC4.17□□□□□ -1.74
CIITAP33076 CYP4F29P-201ENST00000420685 446 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC245054.1-201ENST00000420944 258 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.17□□□□□ -1.74
CIITAP33076 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 RPL23AP16-201ENST00000441715 421 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.17□□□□□ -1.74
CIITAP33076 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.17□□□□□ -1.74
CIITAP33076 SSXP1-201ENST00000453640 473 ntBASIC4.17□□□□□ -1.74
CIITAP33076 RNU7-136P-201ENST00000458819 69 ntBASIC4.17□□□□□ -1.74
CIITAP33076 MEMO1P3-201ENST00000459811 302 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC010301.1-201ENST00000473936 355 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.17□□□□□ -1.74
CIITAP33076 TMEM251P1-201ENST00000503717 318 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 RPL37P25-201ENST00000507308 276 ntBASIC4.17□□□□□ -1.74
CIITAP33076 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 ZNF705CP-201ENST00000530515 889 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC107016.1-201ENST00000550463 337 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.17□□□□□ -1.74
CIITAP33076 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.17□□□□□ -1.74
CIITAP33076 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.17□□□□□ -1.74
CIITAP33076 AC020914.4-201ENST00000597690 277 ntBASIC4.17□□□□□ -1.74
CIITAP33076 BNIP3P33-201ENST00000598912 569 ntBASIC4.17□□□□□ -1.74
CIITAP33076 IGHV3-29-201ENST00000604817 344 ntBASIC4.17□□□□□ -1.74
CIITAP33076 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 AC018755.4-201ENST00000619715 454 ntBASIC4.17□□□□□ -1.74
CIITAP33076 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 AC005832.2-201ENST00000538921 1430 ntBASIC4.17□□□□□ -1.74
CIITAP33076 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.17□□□□□ -1.74
CIITAP33076 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CIITAP33076 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CIITAP33076 MAPK10-373ENST00000641983 6772 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC095050.2-201ENST00000510748 1458 ntBASIC4.17□□□□□ -1.74
CIITAP33076 AC027287.1-201ENST00000553115 1453 ntBASIC4.17□□□□□ -1.74
CIITAP33076 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.16□□□□□ -1.74
CIITAP33076 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.16□□□□□ -1.74
CIITAP33076 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 AP002907.1-201ENST00000606361 1430 ntBASIC4.16□□□□□ -1.74
CIITAP33076 RNA5SP167-201ENST00000365461 116 ntBASIC4.16□□□□□ -1.74
CIITAP33076 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.16□□□□□ -1.74
CIITAP33076 SNORA51.6-201ENST00000384151 125 ntBASIC4.16□□□□□ -1.74
CIITAP33076 MTHFD2P2-201ENST00000407725 247 ntBASIC4.16□□□□□ -1.74
CIITAP33076 UBE2V1P10-201ENST00000414685 269 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.16□□□□□ -1.74
CIITAP33076 AC005517.2-201ENST00000424673 553 ntBASIC4.16□□□□□ -1.74
CIITAP33076 NDUFB1P1-201ENST00000435191 180 ntBASIC4.16□□□□□ -1.74
CIITAP33076 USP9YP7-201ENST00000436723 430 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.16□□□□□ -1.74
CIITAP33076 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.16□□□□□ -1.74
CIITAP33076 USP9YP32-201ENST00000452432 430 ntBASIC4.16□□□□□ -1.74
CIITAP33076 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.16□□□□□ -1.74
CIITAP33076 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.16□□□□□ -1.74
CIITAP33076 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CIITAP33076 AC026403.1-201ENST00000518938 295 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms