Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092754.2-201ENST00000463506 460 ntBASIC2.53□□□□□ -2
COL1A1P02452 RPL38P4-201ENST00000502376 214 ntBASIC2.53□□□□□ -2
COL1A1P02452 IGHV3-76-201ENST00000522465 295 ntBASIC2.53□□□□□ -2
COL1A1P02452 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.53□□□□□ -2
COL1A1P02452 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.53□□□□□ -2
COL1A1P02452 AP004247.3-201ENST00000608682 624 ntBASIC2.53□□□□□ -2
COL1A1P02452 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL1A1P02452 ZNF33CP-201ENST00000432492 2030 ntBASIC2.53□□□□□ -2.01
COL1A1P02452 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.52□□□□□ -2.01
COL1A1P02452 MTND4P35-201ENST00000604257 1375 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AL512283.1-201ENST00000606756 1384 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.52□□□□□ -2.01
COL1A1P02452 AC005517.2-201ENST00000424673 553 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AC004866.2-201ENST00000438285 481 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.52□□□□□ -2.01
COL1A1P02452 AC011753.1-201ENST00000451001 220 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.52□□□□□ -2.01
COL1A1P02452 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.52□□□□□ -2.01
COL1A1P02452 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.52□□□□□ -2.01
COL1A1P02452 AC011494.1-201ENST00000596454 237 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AP003072.5-201ENST00000623872 773 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AL359715.4-201ENST00000606629 1436 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
COL1A1P02452 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
COL1A1P02452 RNA5SP295-201ENST00000362655 121 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 RNA5SP213-201ENST00000391031 106 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.52□□□□□ -2.01
COL1A1P02452 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.52□□□□□ -2.01
COL1A1P02452 RPL34P26-201ENST00000445636 354 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.52□□□□□ -2.01
COL1A1P02452 AC025881.1-201ENST00000518851 512 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.52□□□□□ -2.01
COL1A1P02452 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.52□□□□□ -2.01
COL1A1P02452 TRAV11-201ENST00000539512 339 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.52□□□□□ -2.01
COL1A1P02452 AP001521.1-201ENST00000609150 300 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AC116563.2-201ENST00000624751 535 ntBASIC2.52□□□□□ -2.01
COL1A1P02452 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
COL1A1P02452 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.52□□□□□ -2.01
COL1A1P02452 ZNF271P-202ENST00000465539 1970 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL1A1P02452 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.51□□□□□ -2.01
COL1A1P02452 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
COL1A1P02452 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 AF274854.1-201ENST00000413236 615 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.51□□□□□ -2.01
COL1A1P02452 AL591719.1-201ENST00000444669 744 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 AC072039.1-201ENST00000477611 581 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.51□□□□□ -2.01
COL1A1P02452 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.51□□□□□ -2.01
COL1A1P02452 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
COL1A1P02452 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
COL1A1P02452 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.51□□□□□ -2.01
COL1A1P02452 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL1A1P02452 PTP4A1P6-201ENST00000531034 478 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.51□□□□□ -2.01
COL1A1P02452 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.51□□□□□ -2.01
COL1A1P02452 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.51□□□□□ -2.01
COL1A1P02452 AL157700.1-201ENST00000561973 1432 ntBASIC2.51□□□□□ -2.01
COL1A1P02452 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL1A1P02452 AC244517.1-201ENST00000606030 2086 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL1A1P02452 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL1A1P02452 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
COL1A1P02452 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
COL1A1P02452 RN7SKP226-201ENST00000364912 300 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 AP000567.1-201ENST00000406413 156 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 AC005005.2-201ENST00000420779 380 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.5□□□□□ -2.01
COL1A1P02452 TRIM60P18-201ENST00000441518 828 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.5□□□□□ -2.01
COL1A1P02452 AC087190.1-201ENST00000484462 480 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.5□□□□□ -2.01
COL1A1P02452 AC078918.1-201ENST00000498515 228 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.5□□□□□ -2.01
COL1A1P02452 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.5□□□□□ -2.01
COL1A1P02452 RNU4-60P-201ENST00000517239 135 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 AK6P1-201ENST00000540219 478 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COL1A1P02452 AL391834.1-201ENST00000609609 560 ntBASIC2.5□□□□□ -2.01
COL1A1P02452 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
COL1A1P02452 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL1A1P02452 Y_RNA.116-201ENST00000363292 103 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
COL1A1P02452 Y_RNA.540-201ENST00000384638 111 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 MIR499A-201ENST00000384903 122 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 RNU6-321P-201ENST00000410912 106 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 RPL31P2-201ENST00000413849 377 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.49□□□□□ -2.01
COL1A1P02452 ATP5F1P1-201ENST00000433775 569 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 SDR42E1P3-201ENST00000438345 502 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 USP9YP8-201ENST00000441913 500 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.49□□□□□ -2.01
COL1A1P02452 AC146507.1-201ENST00000468335 354 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 AC104986.1-201ENST00000517978 436 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.49□□□□□ -2.01
COL1A1P02452 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.49□□□□□ -2.01
COL1A1P02452 Y_RNA.783-201ENST00000613546 102 ntBASIC2.49□□□□□ -2.01
COL1A1P02452 AL133370.2-201ENST00000619934 439 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms