Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC113368.1-201ENST00000603736 382 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC103710.2-201ENST00000609912 942 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AC006065.5-201ENST00000623427 349 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 AP002907.1-201ENST00000606361 1430 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 MTCO1P24-201ENST00000515438 1558 ntBASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CPSF4LA6NMK7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC009487.4-201ENST00000624969 3585 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 RPL23AP39-201ENST00000415533 405 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 PSMA2P3-201ENST00000429685 675 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AL645568.3-201ENST00000433683 316 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 XKRY2-201ENST00000442362 1093 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC010627.1-201ENST00000503819 1294 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 SEM1P1-201ENST00000506694 209 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 HMGB1P47-201ENST00000511281 589 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 OR4V1P-201ENST00000525394 1140 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 MIR6840-201ENST00000611937 71 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC012150.2-201ENST00000621300 544 ntBASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CPSF4LA6NMK7 AC092881.1-201ENST00000638218 2733 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 AL596028.1-201ENST00000326971 197 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 MIR1294-201ENST00000408503 142 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 HSFY3P-201ENST00000444242 1191 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 UBBP3-201ENST00000445497 241 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 TRBV12-1-201ENST00000479785 344 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 RPS29P21-201ENST00000496272 170 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 ATP5F1P7-201ENST00000567330 760 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 RN7SL371P-201ENST00000578099 267 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 MIR3690-201ENST00000580266 75 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 LLPHP1-201ENST00000603571 367 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 RNA5SP108-201ENST00000605921 117 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 Z82209.1-201ENST00000422141 2135 ntBASIC1.6□□□□□ -2.15
CPSF4LA6NMK7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 RPL17P50-201ENST00000396131 546 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC072039.1-201ENST00000477611 581 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 RPL21P103-201ENST00000479921 488 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC022493.1-201ENST00000492984 337 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 RN7SKP244-201ENST00000516513 307 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC013444.2-201ENST00000603317 787 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AC093673.2-201ENST00000609674 331 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 HSPA8P4-201ENST00000511877 1920 ntBASIC1.59□□□□□ -2.15
CPSF4LA6NMK7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 MIR607-201ENST00000385241 96 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 SNORA40.18-201ENST00000391200 128 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 RNU2-40P-201ENST00000410833 196 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC109780.2-201ENST00000413467 845 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 SNORD59.2-201ENST00000516873 68 ntBASIC1.58□□□□□ -2.16
CPSF4LA6NMK7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms