Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TMEM88BA6NKF7 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.85□□□□□ -1.47
TMEM88BA6NKF7 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
TMEM88BA6NKF7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TMEM88BA6NKF7 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.85□□□□□ -1.47
TMEM88BA6NKF7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.85□□□□□ -1.47
TMEM88BA6NKF7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RNU1-94P-201ENST00000362627 173 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RNU6-190P-201ENST00000384154 102 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RNA5SP397-201ENST00000391323 118 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RPL23AP17-201ENST00000401064 499 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RPL7AP73-201ENST00000413490 353 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 AC090774.1-201ENST00000435925 246 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 GTF2IP13-201ENST00000438487 386 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 MTCYBP6-201ENST00000441810 138 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 NEFMP1-201ENST00000443423 1006 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RPS5P7-201ENST00000456664 608 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 VN1R105P-201ENST00000486595 910 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 Y_RNA.682-201ENST00000516457 100 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 AP001804.3-201ENST00000525146 880 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 FRG2DP-202ENST00000566967 323 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 MIR3158-1-201ENST00000583596 81 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 AL158032.1-201ENST00000605401 106 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 RNA5SP108-201ENST00000605921 117 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 SDR42E1P2-201ENST00000614861 481 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 AL356489.2-201ENST00000566968 3528 ntBASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.84□□□□□ -1.47
TMEM88BA6NKF7 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
TMEM88BA6NKF7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TMEM88BA6NKF7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TMEM88BA6NKF7 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 RN7SKP280-201ENST00000364196 304 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC114755.2-201ENST00000413520 361 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 REG1CP-206ENST00000447469 496 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AL358232.1-201ENST00000448030 501 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC022133.1-201ENST00000490961 571 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC108145.1-201ENST00000503770 153 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 SCARNA22-201ENST00000503991 125 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 RNU6-123P-201ENST00000516163 102 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 RNU4-60P-201ENST00000517239 135 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 OR11H5P-201ENST00000554039 926 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 MIR3941-201ENST00000582572 103 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 A2MP1-204ENST00000566278 4130 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TMEM88BA6NKF7 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 Y_RNA.128-201ENST00000363391 112 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AL451142.1-201ENST00000375867 775 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 RPL37P10-201ENST00000412884 288 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AL139095.3-201ENST00000419672 1203 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 PPP1R11P2-201ENST00000423543 382 ntBASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.82□□□□□ -1.48
TMEM88BA6NKF7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms