Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC009220.3-201ENST00000604318 586 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AP001330.4-201ENST00000604350 154 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC080013.3-201ENST00000606839 578 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC007349.4-201ENST00000608114 532 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC131235.4-201ENST00000609288 620 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC097478.2-201ENST00000610572 514 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 AC006927.4-201ENST00000639187 543 ntBASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHGA1Q9Y5H4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AL645937.1-201ENST00000641739 1652 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC005539.1-201ENST00000443768 1479 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AL390862.1-201ENST00000635467 1469 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 IPO8P1-201ENST00000455509 3109 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 HMGB1P49-201ENST00000418882 569 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AL365396.1-201ENST00000430854 671 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 ATP5JP1-201ENST00000431631 322 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 MTCO2P20-201ENST00000437339 673 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 HIGD1AP11-201ENST00000438361 280 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC010655.1-201ENST00000449336 292 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 ARPC3P2-201ENST00000457786 533 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 FAM172BP-201ENST00000487497 1089 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 MTCYBP17-201ENST00000503579 789 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC010265.1-201ENST00000513509 211 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 FABP5P12-201ENST00000515543 389 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC103783.1-201ENST00000520506 373 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 BDH2P1-201ENST00000602288 736 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 U7.8-201ENST00000619968 63 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AC116618.1-201ENST00000634617 774 ntBASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCDHGA1Q9Y5H4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AP000776.1-201ENST00000530032 1663 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 OR5H2-201ENST00000355273 945 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 RNU4-28P-201ENST00000364739 141 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AL136372.1-201ENST00000403060 228 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 RPS15AP38-201ENST00000413110 372 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AL590233.1-201ENST00000430017 456 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 ARPC3P5-201ENST00000448802 534 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 MTND1P16-201ENST00000465177 898 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 RNU1-103P-201ENST00000516502 125 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 PDCL2P2-201ENST00000533651 189 ntBASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHGA1Q9Y5H4 AC090877.1-201ENST00000561418 344 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms