Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC023158.2-201ENST00000614876 543 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC092650.2-201ENST00000619984 902 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC073348.1-201ENST00000623002 331 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC091903.1-201ENST00000624322 454 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC073476.4-201ENST00000628409 72 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC099654.9-201ENST00000637055 678 ntBASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLCF1Q9UBD9 CDR1-202ENST00000625883 1485 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNU6-216P-201ENST00000363282 104 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNU5D-1-201ENST00000363299 116 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNU1-140P-201ENST00000365040 165 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 SNORD116-12-201ENST00000384468 92 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNU6-878P-201ENST00000384578 110 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNU6-925P-201ENST00000384629 104 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 SNORD15B-201ENST00000384714 146 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 UBA52P6-201ENST00000399822 382 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNU6-712P-201ENST00000410558 100 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 GLRXP1-201ENST00000423261 334 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RPL23AP74-201ENST00000437246 471 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC108734.1-201ENST00000439549 399 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC016696.1-201ENST00000446949 318 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RFC5P1-201ENST00000454419 874 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 HMGN1P18-201ENST00000457642 277 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC010401.1-201ENST00000463867 348 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RN7SL442P-201ENST00000473804 320 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC011825.1-201ENST00000484967 388 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 OR4G11P-201ENST00000492842 939 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AL024509.2-201ENST00000493462 493 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC119751.4-201ENST00000507498 357 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC010374.2-201ENST00000512933 535 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 SCARNA20.6-201ENST00000517251 106 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AP002404.1-201ENST00000532005 451 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 MTND3P13-201ENST00000574391 343 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC055876.5-201ENST00000605667 259 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC135507.2-201ENST00000612443 309 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC018755.4-201ENST00000619715 454 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 U6.101-201ENST00000637707 76 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AF117829.1-206ENST00000621883 3802 ntBASIC2.78□□□□□ -1.96
CLCF1Q9UBD9 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 SNRPEP2-201ENST00000397592 279 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AL161449.1-201ENST00000414531 1199 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 BX679664.1-201ENST00000434429 253 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC092427.1-201ENST00000439177 601 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 NANOGNBP1-201ENST00000448444 480 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 HMGB1P25-201ENST00000468402 607 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 RPL7P23-201ENST00000493874 747 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC004062.1-201ENST00000509926 645 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC010625.1-201ENST00000511296 403 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC026412.2-201ENST00000512270 1075 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 RNU6-27P-201ENST00000516146 107 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 LARP7P2-201ENST00000575306 125 ntBASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.77□□□□□ -1.97
CLCF1Q9UBD9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms