Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.82□□□□□ -1.64
CD248Q9HCU0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CD248Q9HCU0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CD248Q9HCU0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD248Q9HCU0 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.82□□□□□ -1.64
CD248Q9HCU0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CD248Q9HCU0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD248Q9HCU0 CKAP2P1-201ENST00000555477 2049 ntBASIC4.82□□□□□ -1.64
CD248Q9HCU0 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CD248Q9HCU0 NMD3P1-201ENST00000439704 1488 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 NOL8P1-201ENST00000508336 3529 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD248Q9HCU0 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 OR11H4-201ENST00000315409 1082 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RNA5SP513-201ENST00000364648 118 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 OR52E6-202ENST00000379946 954 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RNU6-1160P-201ENST00000384546 104 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 RPL23AP48-201ENST00000406913 488 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 SNORA11-201ENST00000408789 128 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RN7SKP140-201ENST00000411196 284 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RNA5SP39-201ENST00000411245 120 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RPS7P15-201ENST00000415804 584 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AL353678.1-201ENST00000422735 741 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RPL7P57-201ENST00000423238 740 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AL589872.1-201ENST00000426602 288 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RSL24D1P6-201ENST00000426934 401 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC008065.1-201ENST00000428525 348 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RPL7P4-203ENST00000430239 730 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RPS17P8-201ENST00000434525 335 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 LSM1P1-201ENST00000438629 273 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC006480.1-201ENST00000449887 378 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC133473.1-201ENST00000455173 299 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 MTCO1P42-201ENST00000457379 726 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC130509.1-201ENST00000464158 433 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC103987.1-201ENST00000473394 348 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC103851.1-201ENST00000506833 274 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RNU7-30P-201ENST00000516835 62 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RN7SKP116-201ENST00000516902 319 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 Y_RNA.719-201ENST00000517156 106 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC093519.1-201ENST00000566109 298 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC090312.2-201ENST00000582687 378 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 MIR3171-201ENST00000584270 74 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC006116.10-201ENST00000591836 581 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AL590392.1-201ENST00000604960 446 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC113139.1-201ENST00000605049 239 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 AL356218.2-201ENST00000605264 187 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD248Q9HCU0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 IQCB2P-201ENST00000401788 1633 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD248Q9HCU0 AC011266.1-201ENST00000624119 3569 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CD248Q9HCU0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD248Q9HCU0 ERCC6-202ENST00000374127 1782 ntBASIC4.81□□□□□ -1.64
CD248Q9HCU0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD248Q9HCU0 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC108467.2-201ENST00000617640 1597 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CD248Q9HCU0 Y_RNA.159-201ENST00000363674 87 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 RNU6-282P-201ENST00000365357 103 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CD248Q9HCU0 SNORD115.1-201ENST00000391109 76 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 MIR548P-201ENST00000408336 84 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 MIR320C1-201ENST00000408566 88 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC092634.6-201ENST00000418558 192 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC024082.2-201ENST00000434771 238 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC236972.2-201ENST00000434979 310 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 SNORD108-201ENST00000459332 71 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC097493.1-201ENST00000463958 372 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 AP000926.1-201ENST00000479573 241 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 VWA8P1-201ENST00000510889 176 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC018797.3-201ENST00000513388 1241 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.8□□□□□ -1.64
CD248Q9HCU0 RN7SKP122-201ENST00000515923 296 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 RN7SKP13-201ENST00000515933 244 ntBASIC4.8□□□□□ -1.64
CD248Q9HCU0 RNU1-6P-201ENST00000516290 144 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 158.6 ms