Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
BHLHE41Q9C0J9 SNORA51.1-201ENST00000363243 140 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC019155.1-201ENST00000382242 574 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 Y_RNA.645-201ENST00000391229 102 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 CYB5AP4-201ENST00000396692 399 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 HMGB1P20-201ENST00000402555 677 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AL137014.1-201ENST00000420490 1226 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AL669831.1-202ENST00000428504 417 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AL359672.1-201ENST00000442302 409 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 HMGB1P25-201ENST00000468402 607 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC087884.1-201ENST00000469738 328 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 RPL21P103-201ENST00000479921 488 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC026979.1-201ENST00000492525 396 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 RN7SL101P-201ENST00000496350 279 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 HIGD1AP14-201ENST00000507617 282 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 RNU6-677P-201ENST00000516914 101 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AL121612.2-201ENST00000612261 482 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC243312.2-201ENST00000623340 601 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC073869.8-201ENST00000641806 335 ntBASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BHLHE41Q9C0J9 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 PABPC1P7-201ENST00000413177 1513 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SRRM1P3-201ENST00000426911 2678 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RNU1-146P-201ENST00000364015 165 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RNU6-450P-201ENST00000364654 107 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RNU6-146P-201ENST00000384602 108 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SNORA17A-201ENST00000391185 133 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC016769.2-201ENST00000414815 475 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC099677.1-201ENST00000420575 175 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 USP9YP30-201ENST00000430729 455 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SNORD5.1-201ENST00000458800 75 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC010655.3-201ENST00000478818 450 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC104564.1-201ENST00000493028 407 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RPL7P23-201ENST00000493874 747 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 HIGD1AP3-201ENST00000515857 278 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RNU6-941P-201ENST00000516346 108 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 RNA5SP384-201ENST00000516615 116 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AP003385.6-201ENST00000531603 374 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC005899.2-201ENST00000584353 90 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC011494.1-201ENST00000596454 237 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC174048.1-201ENST00000603389 144 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AL161423.1-201ENST00000613700 262 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 U2.1-201ENST00000618978 145 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SNORA17.5-201ENST00000630429 132 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 AC010266.2-201ENST00000564741 3255 ntBASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.2□□□□□ -1.58
BHLHE41Q9C0J9 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
BHLHE41Q9C0J9 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
BHLHE41Q9C0J9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms