Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-137P-201ENST00000363680 108 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA72.2-201ENST00000365028 127 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-213P-201ENST00000384051 104 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA51.8-201ENST00000384234 132 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ELOCP19-201ENST00000411919 318 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC109638.1-201ENST00000417406 326 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 PPIL1P1-201ENST00000423936 499 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC091390.3-201ENST00000426478 338 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 BTF3P11-201ENST00000426582 477 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 MTND4LP9-201ENST00000427694 174 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AL139135.2-201ENST00000445040 433 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ANP32BP2-201ENST00000454525 545 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC006026.2-201ENST00000457376 180 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC092798.1-201ENST00000458542 409 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL685P-201ENST00000476271 298 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL369P-201ENST00000477138 299 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL647P-201ENST00000485429 300 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC139453.3-201ENST00000493276 369 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA25.12-201ENST00000516202 82 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-572P-201ENST00000516724 80 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SCARNA18.2-201ENST00000516882 84 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 NDUFA3P2-201ENST00000531434 232 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC112693.2-201ENST00000556538 232 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 MIR4428-201ENST00000584884 73 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 FKBP1AP1-201ENST00000594588 318 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AL138963.2-201ENST00000605137 226 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC022441.3-201ENST00000605737 136 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AL161931.1-201ENST00000612768 246 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC116165.3-201ENST00000614524 400 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC061999.1-201ENST00000624454 177 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 HBG1-202ENST00000632727 369 ntTSL 3 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC007159.1-201ENST00000566529 4706 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 AC007842.1-201ENST00000597336 2039 ntBASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRTAP3-1Q9BYR8 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 NACA-203ENST00000454682 6629 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 CCDC162P-202ENST00000368966 6751 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 FTLP6-201ENST00000355274 422 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1272P-201ENST00000362776 107 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU4-80P-201ENST00000363200 141 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-527P-201ENST00000363425 104 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SKP237-201ENST00000364663 301 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-275P-201ENST00000364910 107 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 SNORA30B-201ENST00000365319 129 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1056P-201ENST00000383996 107 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-281P-201ENST00000384212 103 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNU6-1145P-201ENST00000384246 107 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 MIR329-1-201ENST00000385028 80 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RNA5SP44-201ENST00000410446 133 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 GSTM5P1-201ENST00000434751 660 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AP000281.1-201ENST00000444036 316 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC074290.1-201ENST00000448883 135 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL223P-201ENST00000470401 294 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 RN7SL216P-201ENST00000471607 298 ntBASIC3.31□□□□□ -1.88
KRTAP3-1Q9BYR8 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms