Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR3651-201ENST00000630427 90 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 PRRC2B-203ENST00000405995 9157 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RNU4-43P-201ENST00000410628 137 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RN7SKP17-201ENST00000411242 351 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 PTGES3P4-201ENST00000426243 356 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 NRBF2P3-201ENST00000432731 865 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 H2AFZP5-201ENST00000446960 382 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 OR52Y1P-201ENST00000452418 828 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 TPT1P1-201ENST00000458495 518 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RPL31P50-201ENST00000471002 296 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC110792.1-201ENST00000491826 472 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RNA5SP490-201ENST00000517141 136 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RN7SL802P-201ENST00000577858 299 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 VN1R78P-201ENST00000597393 564 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL133338.2-201ENST00000604292 736 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC016957.2-201ENST00000616998 848 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC073592.7-201ENST00000623659 507 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC099654.14-201ENST00000638599 341 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL117339.4-201ENST00000608335 7063 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 SEC16A-205ENST00000371706 8093 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.123-201ENST00000363338 102 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RNU1-83P-201ENST00000363426 164 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 MIR1302-6-201ENST00000408466 90 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RNU2-21P-201ENST00000410368 188 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC023818.1-201ENST00000498379 384 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC079140.3-201ENST00000511111 550 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RNU6-62P-201ENST00000516526 102 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 SNORA81.3-201ENST00000517283 198 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC087897.1-201ENST00000550134 156 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 FOXG1-AS1-203ENST00000551395 602 ntTSL 4 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 SETP7-201ENST00000552169 453 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RN7SL652P-201ENST00000577769 300 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 EIF1P5-201ENST00000585002 234 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC067747.1-201ENST00000608026 250 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 DISC2.1-201ENST00000612827 205 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC008873.1-201ENST00000625051 138 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 AC006065.6-201ENST00000625201 545 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RPL21P132-201ENST00000331267 462 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.117-201ENST00000363294 101 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.206-201ENST00000364136 102 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 RNU6-1325P-201ENST00000364905 105 ntBASIC1.47□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms