Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHDQ96IW2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.05□□□□□ -1.6
SHDQ96IW2 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHDQ96IW2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
SHDQ96IW2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHDQ96IW2 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.05□□□□□ -1.6
SHDQ96IW2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHDQ96IW2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.05□□□□□ -1.6
SHDQ96IW2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SHDQ96IW2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHDQ96IW2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.05□□□□□ -1.6
SHDQ96IW2 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.05□□□□□ -1.6
SHDQ96IW2 MAPK10-338ENST00000641647 3362 ntBASIC5.05□□□□□ -1.6
SHDQ96IW2 AL157700.1-201ENST00000561973 1432 ntBASIC5.05□□□□□ -1.6
SHDQ96IW2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHDQ96IW2 MTND4P35-201ENST00000604257 1375 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC104118.1-201ENST00000607625 1589 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHDQ96IW2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHDQ96IW2 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHDQ96IW2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHDQ96IW2 RNU6-1287P-201ENST00000362914 107 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 SNORA24.1-201ENST00000384401 135 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 RNU6-1060P-201ENST00000384664 107 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 MIR129-1-201ENST00000384972 72 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AL359634.1-202ENST00000404721 284 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC004975.1-201ENST00000428733 208 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 RPL23AP1-201ENST00000428990 471 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.04□□□□□ -1.6
SHDQ96IW2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC090686.1-201ENST00000481577 749 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC098976.1-201ENST00000513014 541 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 MTND4P7-201ENST00000523876 130 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AC012339.2-201ENST00000523996 453 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.04□□□□□ -1.6
SHDQ96IW2 PSMA3P-201ENST00000555485 635 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.04□□□□□ -1.6
SHDQ96IW2 MIR4795-201ENST00000584182 89 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AC016727.1-205ENST00000605437 569 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AL132765.2-201ENST00000610812 351 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AC011155.2-201ENST00000623202 216 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHDQ96IW2 API5P2-201ENST00000397055 1498 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 AL356489.2-201ENST00000566968 3528 ntBASIC5.04□□□□□ -1.6
SHDQ96IW2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHDQ96IW2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHDQ96IW2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.04□□□□□ -1.6
SHDQ96IW2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SHDQ96IW2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
SHDQ96IW2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHDQ96IW2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.03□□□□□ -1.6
SHDQ96IW2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 AC006206.1-201ENST00000544842 3387 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
SHDQ96IW2 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.03□□□□□ -1.6
SHDQ96IW2 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SHDQ96IW2 RNA5SP453-201ENST00000362503 119 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 SNORD113.2-201ENST00000364166 89 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 SNORA23-201ENST00000365128 182 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 XGY1-201ENST00000381172 446 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 Y_RNA.460-201ENST00000384255 102 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 SNORD3H-201ENST00000384486 214 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 TXNP7-201ENST00000406296 293 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.03□□□□□ -1.6
SHDQ96IW2 RNA5SP345-201ENST00000410646 108 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 RNU4-46P-201ENST00000410818 138 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 ELOCP19-201ENST00000411919 318 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC5.03□□□□□ -1.6
SHDQ96IW2 COX6CP13-201ENST00000428703 226 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 BX276092.6-201ENST00000430476 250 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHDQ96IW2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.03□□□□□ -1.6
SHDQ96IW2 BX276092.8-201ENST00000455722 250 ntBASIC5.03□□□□□ -1.6
SHDQ96IW2 RPL23AP56-201ENST00000460778 453 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms