Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
MS4A3Q96HJ5 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
MS4A3Q96HJ5 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.4□□□□□ -1.38
MS4A3Q96HJ5 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 GOT2P1-201ENST00000440922 1309 ntBASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 AC105749.1-201ENST00000631338 2008 ntBASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.4□□□□□ -1.39
MS4A3Q96HJ5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AL359693.1-201ENST00000614959 2407 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC079741.1-201ENST00000321498 212 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC092268.1-201ENST00000342691 405 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 RNU6-978P-201ENST00000364371 103 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AL031003.1-201ENST00000404229 172 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 Y_RNA.622-201ENST00000411091 108 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 RN7SL251P-201ENST00000464175 297 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC092824.1-201ENST00000483524 576 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 RNA5SP490-201ENST00000517141 136 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AP000620.1-201ENST00000527147 504 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC018523.1-201ENST00000534211 512 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 RN7SL778P-201ENST00000607160 297 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 TUBBP10-201ENST00000427668 1301 ntBASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.39□□□□□ -1.39
MS4A3Q96HJ5 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 PPIAP22-201ENST00000358455 498 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 RNU6-309P-201ENST00000364573 106 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 Y_RNA.323-201ENST00000365157 109 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 GCNT1P4-201ENST00000404096 329 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 RNU6-855P-201ENST00000410395 104 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 RPS26P42-201ENST00000413485 326 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 ELOBP4-201ENST00000423418 296 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 GPM6BP3-201ENST00000442797 145 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 RPL21P10-201ENST00000463521 490 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 UQCRHP4-201ENST00000471686 272 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 SNORA43.2-201ENST00000516652 128 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 SAA3P-201ENST00000533267 365 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 AC027369.5-201ENST00000533838 755 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 IPO5P1-202ENST00000600039 287 ntBASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MS4A3Q96HJ5 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 283.5 ms