Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 U8.9-201ENST00000365667 134 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 NPM1P10-201ENST00000398310 865 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 UBE2V1P15-201ENST00000407776 448 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 MUPP-201ENST00000438111 566 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC005002.1-201ENST00000447458 540 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 TRBV26-201ENST00000456572 344 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 GMPSP1-201ENST00000514075 579 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 RNA5SP367-201ENST00000516557 118 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC126177.3-201ENST00000551839 688 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC090666.1-201ENST00000578241 445 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC008277.2-201ENST00000605196 797 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC245100.7-201ENST00000609678 442 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AC106028.5-201ENST00000610332 395 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 MTND4P21-201ENST00000453886 1357 ntBASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC148Q8NFR7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 RNU5D-1-201ENST00000363299 116 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL590004.2-201ENST00000404787 371 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC109583.1-201ENST00000432156 268 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL590762.3-201ENST00000436372 640 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL645638.1-201ENST00000440519 361 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 Z96811.1-201ENST00000445880 108 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 RPS27AP9-201ENST00000477681 438 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AADACP1-206ENST00000561502 1193 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 CYCSP39-201ENST00000565821 309 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AL160281.1-201ENST00000605307 311 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC012467.1-201ENST00000607740 256 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC006329.2-201ENST00000611491 394 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 SGO1P1-201ENST00000603525 1447 ntBASIC3.18□□□□□ -1.9
CCDC148Q8NFR7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 MIR16-1-201ENST00000385271 89 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL21P75-201ENST00000396599 483 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL21P28-201ENST00000401418 483 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AL138827.1-201ENST00000402666 306 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AL592114.1-201ENST00000403842 483 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC105272.1-201ENST00000438604 198 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL21P2-201ENST00000440049 481 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL39P40-201ENST00000445481 146 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL21P39-201ENST00000463605 483 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC011979.1-201ENST00000472300 483 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL21P93-201ENST00000480465 489 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC233702.1-201ENST00000482905 502 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC087190.1-201ENST00000484462 480 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC093591.1-201ENST00000491435 481 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL21P16-201ENST00000495531 483 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC009901.1-201ENST00000506703 541 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC010468.3-201ENST00000508225 458 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 PRELID3BP4-201ENST00000515476 571 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 RPL23AP78-201ENST00000599928 470 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AC091057.2-201ENST00000602594 792 ntBASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC148Q8NFR7 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms