Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 MIR6766-201ENST00000622641 72 ntBASIC1.82□□□□□ -2.12
SNCAP37840 AL031601.2-202ENST00000622650 282 ntBASIC1.82□□□□□ -2.12
SNCAP37840 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SNCAP37840 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.82□□□□□ -2.12
SNCAP37840 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SNCAP37840 AC097714.1-201ENST00000511272 1647 ntBASIC1.81□□□□□ -2.12
SNCAP37840 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SNCAP37840 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SNCAP37840 RNA5SP387-201ENST00000364226 106 ntBASIC1.81□□□□□ -2.12
SNCAP37840 RNU4-72P-201ENST00000410754 173 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AL513331.1-201ENST00000411908 397 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.81□□□□□ -2.12
SNCAP37840 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.81□□□□□ -2.12
SNCAP37840 AC107081.1-201ENST00000414975 361 ntBASIC1.81□□□□□ -2.12
SNCAP37840 NUP35P1-201ENST00000422734 947 ntBASIC1.81□□□□□ -2.12
SNCAP37840 NANOGP5-201ENST00000424456 877 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AL031663.1-201ENST00000437445 219 ntBASIC1.81□□□□□ -2.12
SNCAP37840 IPO7P1-201ENST00000442031 636 ntBASIC1.81□□□□□ -2.12
SNCAP37840 IFNA11P-201ENST00000446352 526 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AL157827.1-201ENST00000447622 132 ntBASIC1.81□□□□□ -2.12
SNCAP37840 RPL23AP7-203ENST00000449021 469 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
SNCAP37840 RPS15AP34-201ENST00000487776 387 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AC008413.1-201ENST00000511864 177 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.81□□□□□ -2.12
SNCAP37840 MTCYBP20-201ENST00000524239 1129 ntBASIC1.81□□□□□ -2.12
SNCAP37840 NDUFS5P6-201ENST00000529136 295 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.81□□□□□ -2.12
SNCAP37840 ANP32BP3-201ENST00000559213 706 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.81□□□□□ -2.12
SNCAP37840 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.81□□□□□ -2.12
SNCAP37840 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.81□□□□□ -2.12
SNCAP37840 MIR5007-201ENST00000583098 95 ntBASIC1.81□□□□□ -2.12
SNCAP37840 RPS15AP11-201ENST00000594193 385 ntBASIC1.81□□□□□ -2.12
SNCAP37840 U73023.1-201ENST00000603134 700 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AC103810.6-201ENST00000606708 136 ntBASIC1.81□□□□□ -2.12
SNCAP37840 MIR6132-201ENST00000622083 109 ntBASIC1.81□□□□□ -2.12
SNCAP37840 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.81□□□□□ -2.12
SNCAP37840 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.81□□□□□ -2.12
SNCAP37840 ZNF37BP-203ENST00000452306 1352 ntBASIC1.81□□□□□ -2.12
SNCAP37840 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
SNCAP37840 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SNCAP37840 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
SNCAP37840 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.8□□□□□ -2.12
SNCAP37840 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SNCAP37840 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SNCAP37840 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNCAP37840 SNORA5B-201ENST00000363786 132 ntBASIC1.8□□□□□ -2.12
SNCAP37840 SET-203ENST00000372688 801 ntTSL 2 BASIC1.8□□□□□ -2.12
SNCAP37840 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
SNCAP37840 SNORA67.4-201ENST00000384688 142 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.8□□□□□ -2.12
SNCAP37840 RPS15AP40-201ENST00000419621 391 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.8□□□□□ -2.12
SNCAP37840 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.8□□□□□ -2.12
SNCAP37840 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.8□□□□□ -2.12
SNCAP37840 MTCO1P39-201ENST00000426148 480 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC1.8□□□□□ -2.12
SNCAP37840 MTCO1P45-201ENST00000431457 267 ntBASIC1.8□□□□□ -2.12
SNCAP37840 MYL8P-204ENST00000431574 518 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AC005002.1-201ENST00000447458 540 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AL021397.1-201ENST00000451806 248 ntBASIC1.8□□□□□ -2.12
SNCAP37840 RPL23AP70-201ENST00000483361 460 ntBASIC1.8□□□□□ -2.12
SNCAP37840 RPS27P21-201ENST00000486977 252 ntBASIC1.8□□□□□ -2.12
SNCAP37840 RN7SL636P-201ENST00000497504 294 ntBASIC1.8□□□□□ -2.12
SNCAP37840 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SNCAP37840 AC113155.1-201ENST00000511141 769 ntBASIC1.8□□□□□ -2.12
SNCAP37840 RNA5SP356-201ENST00000515972 94 ntBASIC1.8□□□□□ -2.12
SNCAP37840 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNCAP37840 MTND2P26-201ENST00000528255 1029 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AMZ2P1-203ENST00000565833 850 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AC022069.1-201ENST00000582910 658 ntBASIC1.8□□□□□ -2.12
SNCAP37840 GLUD1P4-201ENST00000590914 418 ntBASIC1.8□□□□□ -2.12
SNCAP37840 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.8□□□□□ -2.12
SNCAP37840 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.8□□□□□ -2.12
SNCAP37840 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.8□□□□□ -2.12
SNCAP37840 AC005000.2-201ENST00000605468 310 ntBASIC1.8□□□□□ -2.12
SNCAP37840 MIR7973-1-201ENST00000614683 76 ntBASIC1.8□□□□□ -2.12
SNCAP37840 AL138880.2-201ENST00000616214 239 ntBASIC1.8□□□□□ -2.12
SNCAP37840 uc_338.20-201ENST00000621563 178 ntBASIC1.8□□□□□ -2.12
SNCAP37840 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.8□□□□□ -2.12
SNCAP37840 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
SNCAP37840 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 AC010680.1-201ENST00000590024 3590 ntBASIC1.79□□□□□ -2.12
SNCAP37840 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 HMGB1P5-201ENST00000255320 642 ntBASIC1.79□□□□□ -2.12
SNCAP37840 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SNCAP37840 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.79□□□□□ -2.12
SNCAP37840 RNU1-52P-201ENST00000384190 164 ntBASIC1.79□□□□□ -2.12
SNCAP37840 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC1.79□□□□□ -2.12
SNCAP37840 MTCYBP24-201ENST00000420387 1106 ntBASIC1.79□□□□□ -2.12
SNCAP37840 RPL7P37-201ENST00000425095 738 ntBASIC1.79□□□□□ -2.12
SNCAP37840 OR51AB1P-201ENST00000429046 620 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AC006946.1-201ENST00000429106 328 ntBASIC1.79□□□□□ -2.12
SNCAP37840 SDR42E1P3-201ENST00000438345 502 ntBASIC1.79□□□□□ -2.12
SNCAP37840 AL109933.2-201ENST00000452651 260 ntBASIC1.79□□□□□ -2.12
SNCAP37840 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.79□□□□□ -2.12
SNCAP37840 AL031183.1-201ENST00000457667 207 ntBASIC1.79□□□□□ -2.12
SNCAP37840 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.79□□□□□ -2.12
SNCAP37840 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms