Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RNF6P1-201ENST00000444889 1784 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 SEPT7P7-201ENST00000420492 1301 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 RNU6-14P-201ENST00000384630 106 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 MIR320B1-201ENST00000390209 79 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 AC048351.1-201ENST00000420064 602 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 AC073310.1-201ENST00000423226 1033 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN4AP35499 AL513321.1-201ENST00000441175 761 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 COX6CP2-201ENST00000444980 225 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 HMGB1P26-201ENST00000452520 628 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 AC089999.1-201ENST00000460336 374 ntBASIC2.81□□□□□ -1.96
SCN4AP35499 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN4AP35499 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN4AP35499 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN4AP35499 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN4AP35499 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN4AP35499 AL355578.1-201ENST00000607405 1328 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 AC011460.1-201ENST00000636268 1834 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN4AP35499 RNA5SP88-201ENST00000365560 109 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN4AP35499 RNU6-98P-201ENST00000384173 107 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 RNU4-27P-201ENST00000410889 139 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 RPL21P2-201ENST00000440049 481 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 HMGB1P48-201ENST00000446155 598 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 IFNWP4-201ENST00000453148 294 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 OR52A4P-202ENST00000481634 799 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN4AP35499 AC108729.3-201ENST00000513484 108 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN4AP35499 AP001207.1-201ENST00000524051 481 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.8□□□□□ -1.96
SCN4AP35499 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN4AP35499 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN4AP35499 AL451074.6-201ENST00000608512 729 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN4AP35499 AF127577.6-201ENST00000623352 2191 ntBASIC2.8□□□□□ -1.96
SCN4AP35499 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN4AP35499 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN4AP35499 RNA5SP456-201ENST00000364002 114 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 HMGB3P31-201ENST00000413333 595 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 MTND4P15-201ENST00000437913 1033 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AL035407.2-201ENST00000454090 378 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AP000705.1-201ENST00000454567 350 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 MTND2P6-201ENST00000455337 1030 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN4AP35499 OR9N1P-202ENST00000494289 481 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC023050.1-201ENST00000498198 304 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 RN7SKP96-201ENST00000516948 297 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC103833.1-201ENST00000517442 172 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC004923.2-201ENST00000529649 369 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 OR4T1P-201ENST00000554933 911 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN4AP35499 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN4AP35499 AC034268.2-201ENST00000571784 482 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN4AP35499 ZNF92P2-201ENST00000600543 1059 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 MIR8070-201ENST00000616510 88 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 C2orf27A-204ENST00000623058 969 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SCN4AP35499 CFTRP2-201ENST00000634304 199 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 MIR219B-201ENST00000637023 88 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN4AP35499 GABPAP-201ENST00000419271 1356 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN4AP35499 SNORA17.3-201ENST00000391159 129 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN4AP35499 MTCO3P43-201ENST00000440974 771 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AC011816.1-201ENST00000441346 546 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 MRPL50P4-201ENST00000446432 475 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 NPM1P49-201ENST00000448027 714 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 RPL36AP21-201ENST00000490372 323 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AL024509.2-201ENST00000493462 493 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN4AP35499 AC093770.1-201ENST00000511559 571 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN4AP35499 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN4AP35499 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN4AP35499 AC011494.1-201ENST00000596454 237 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AP001521.1-201ENST00000609150 300 ntBASIC2.79□□□□□ -1.96
SCN4AP35499 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN4AP35499 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN4AP35499 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN4AP35499 CUL1P1-201ENST00000509510 2425 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCN4AP35499 SNORA41-201ENST00000384675 132 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN4AP35499 NEK4P1-201ENST00000433383 879 ntBASIC2.78□□□□□ -1.96
SCN4AP35499 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN4AP35499 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN4AP35499 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms