Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 OR4K8P-201ENST00000578842 1048 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 MIR3146-201ENST00000580367 79 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.92□□□□□ -1.62
CNGA1P29973 AC053481.4-201ENST00000583164 216 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AL158211.4-201ENST00000606988 584 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 MIR6891-201ENST00000618788 93 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC009268.2-201ENST00000621925 457 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 AC055839.1-201ENST00000634467 498 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CNGA1P29973 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CNGA1P29973 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CNGA1P29973 RLIMP1-201ENST00000339626 1680 ntBASIC4.92□□□□□ -1.62
CNGA1P29973 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CNGA1P29973 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNGA1P29973 NXPH1-205ENST00000602349 1953 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNGA1P29973 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNGA1P29973 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.91□□□□□ -1.62
CNGA1P29973 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.91□□□□□ -1.62
CNGA1P29973 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CNGA1P29973 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNGA1P29973 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CNGA1P29973 RNU4-1-201ENST00000363925 141 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 RNU6-335P-201ENST00000364563 113 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CNGA1P29973 RNU6-629P-201ENST00000384061 103 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 MIR135A2-201ENST00000384854 100 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 RPL23AP32-201ENST00000395315 459 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 SNORA11.1-201ENST00000408133 129 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.91□□□□□ -1.62
CNGA1P29973 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.91□□□□□ -1.62
CNGA1P29973 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.91□□□□□ -1.62
CNGA1P29973 RPS3AP44-201ENST00000425466 790 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.91□□□□□ -1.62
CNGA1P29973 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.91□□□□□ -1.62
CNGA1P29973 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.91□□□□□ -1.62
CNGA1P29973 FGF7P3-201ENST00000454645 303 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 VN1R105P-201ENST00000486595 910 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 Vault.1-201ENST00000516474 102 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.91□□□□□ -1.62
CNGA1P29973 AC103783.1-201ENST00000520506 373 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.91□□□□□ -1.62
CNGA1P29973 AL161729.3-201ENST00000603533 673 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 AC015813.4-201ENST00000610469 179 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 MIR6075-201ENST00000620782 95 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 AL353748.2-201ENST00000622148 471 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 AC091905.2-201ENST00000623143 306 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.91□□□□□ -1.62
CNGA1P29973 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.91□□□□□ -1.62
CNGA1P29973 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.91□□□□□ -1.62
CNGA1P29973 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CNGA1P29973 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CNGA1P29973 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.91□□□□□ -1.62
CNGA1P29973 MTCO1P9-201ENST00000505577 1534 ntBASIC4.91□□□□□ -1.62
CNGA1P29973 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CNGA1P29973 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNGA1P29973 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.9□□□□□ -1.62
CNGA1P29973 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNGA1P29973 MAPK10-303ENST00000641324 3959 ntBASIC4.9□□□□□ -1.62
CNGA1P29973 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.9□□□□□ -1.62
CNGA1P29973 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CNGA1P29973 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.9□□□□□ -1.62
CNGA1P29973 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNGA1P29973 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.9□□□□□ -1.62
CNGA1P29973 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CNGA1P29973 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CNGA1P29973 RNU5A-8P-201ENST00000364102 114 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RNA5SP387-201ENST00000364226 106 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RNA5SP175-201ENST00000364275 119 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 Y_RNA.516-201ENST00000384541 124 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 MRPL42P2-201ENST00000403169 426 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 HDGFP1-201ENST00000405943 252 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RNU6-648P-201ENST00000410190 107 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RNU2-8P-201ENST00000410727 190 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RNU6-195P-201ENST00000411352 109 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.9□□□□□ -1.63
CNGA1P29973 CCDC58P2-201ENST00000417131 366 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.9□□□□□ -1.63
CNGA1P29973 OR4K11P-201ENST00000431829 904 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.9□□□□□ -1.63
CNGA1P29973 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.9□□□□□ -1.63
CNGA1P29973 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.9□□□□□ -1.63
CNGA1P29973 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CNGA1P29973 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.9□□□□□ -1.63
CNGA1P29973 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.9□□□□□ -1.63
CNGA1P29973 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.9□□□□□ -1.63
CNGA1P29973 AC020893.1-201ENST00000502452 580 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AC114967.1-201ENST00000504890 259 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 RNU6-798P-201ENST00000516912 103 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AP004371.1-201ENST00000525240 214 ntBASIC4.9□□□□□ -1.63
CNGA1P29973 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.9□□□□□ -1.63
CNGA1P29973 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.9□□□□□ -1.63
CNGA1P29973 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CNGA1P29973 COX6CP3-201ENST00000580869 223 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms