Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNU6-712P-201ENST00000410558 100 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC092638.1-201ENST00000411966 1275 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 HMGN2P30-201ENST00000423237 256 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 AL139132.1-201ENST00000431587 344 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 AL590664.1-201ENST00000448065 339 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 BX248409.1-201ENST00000455497 255 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC090525.1-201ENST00000479116 478 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC018630.1-201ENST00000541376 925 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC022069.1-201ENST00000582910 658 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 MIR3605-201ENST00000583214 100 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC073968.1-201ENST00000618594 637 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC068722.2-201ENST00000618734 544 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 AC007998.5-201ENST00000622938 237 ntBASIC2.08□□□□□ -2.08
HLA-DMBP28068 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMBP28068 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMBP28068 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMBP28068 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HLA-DMBP28068 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.08□□□□□ -2.08
HLA-DMBP28068 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMBP28068 RNVU1-3-201ENST00000364313 161 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 SNORD51.1-201ENST00000365405 77 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 RNU6-921P-201ENST00000384361 107 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 RPS4XP3-201ENST00000398541 413 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 PNRC2P1-201ENST00000423940 420 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 RPP40P1-201ENST00000426762 456 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC000041.1-201ENST00000439655 175 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 RPS24P13-201ENST00000442520 397 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AL135938.1-201ENST00000443141 297 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 RPL23AP23-201ENST00000452590 471 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 HMGN3P1-201ENST00000453847 193 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC027673.1-201ENST00000456245 405 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 RPS29P12-201ENST00000460178 152 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC009901.1-201ENST00000506703 541 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC069306.1-201ENST00000507006 843 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 SNORA31.15-201ENST00000516771 132 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMBP28068 NBEAP1-201ENST00000554452 979 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 GTF3AP2-201ENST00000557014 266 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 CYCSP39-201ENST00000565821 309 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 ELOCP29-201ENST00000588193 334 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 VN1R88P-201ENST00000596787 292 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC024153.1-201ENST00000603103 365 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 DUXAP3-201ENST00000603616 594 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AP001330.4-201ENST00000604350 154 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AL033523.1-201ENST00000605153 153 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 MIR6852-201ENST00000621699 66 ntBASIC2.07□□□□□ -2.08
HLA-DMBP28068 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMBP28068 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMBP28068 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HLA-DMBP28068 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HLA-DMBP28068 AL049780.3-201ENST00000624612 1583 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DMBP28068 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
HLA-DMBP28068 MIR26A1-201ENST00000362205 77 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 RNA5SP27-201ENST00000363839 119 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 SNORA1.3-201ENST00000384676 136 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 MIR649-201ENST00000384843 97 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 RNA5SP252-201ENST00000391131 119 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 ARF4P3-201ENST00000397387 509 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC009237.2-201ENST00000421358 284 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AL645937.1-202ENST00000421799 937 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.06□□□□□ -2.08
HLA-DMBP28068 MTND4P24-201ENST00000424002 397 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 AC079780.1-201ENST00000428259 207 ntBASIC2.06□□□□□ -2.08
HLA-DMBP28068 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms