Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PTPRAP18433 Y_RNA.5-201ENST00000362334 102 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 Y_RNA.188-201ENST00000363952 111 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 RNU6-1226P-201ENST00000384317 107 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 MRPL42P3-201ENST00000401492 326 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 MIR1302-3-201ENST00000408128 138 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
PTPRAP18433 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 GPS2P1-201ENST00000411761 986 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 MCFD2P1-201ENST00000417812 300 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 MRPS21P2-201ENST00000424704 264 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 SKA2P1-201ENST00000425592 390 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 AC234779.1-201ENST00000425910 285 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPRAP18433 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.62□□□□□ -1.51
PTPRAP18433 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPRAP18433 AC104058.1-201ENST00000448028 297 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 RN7SL283P-201ENST00000489055 303 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPRAP18433 AC083829.1-201ENST00000503756 657 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 AC016559.2-201ENST00000510759 359 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 RNU6-764P-201ENST00000516396 105 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 RNU6-256P-201ENST00000516747 97 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 RNU6-1213P-201ENST00000517075 94 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 HMGB1P19-201ENST00000517578 577 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 AC090136.1-201ENST00000520009 240 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.62□□□□□ -1.51
PTPRAP18433 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 MIR3672-201ENST00000584290 82 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.62□□□□□ -1.51
PTPRAP18433 NUTF2P8-201ENST00000604593 363 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.62□□□□□ -1.51
PTPRAP18433 Z69720.2-201ENST00000624755 279 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPRAP18433 SMG1P6-201ENST00000532337 2930 ntBASIC5.62□□□□□ -1.51
PTPRAP18433 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PTPRAP18433 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPRAP18433 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PTPRAP18433 AC121333.1-201ENST00000567488 2709 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 RNU6-511P-201ENST00000363496 107 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 RNU6-1222P-201ENST00000384615 107 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 MIR92A2-201ENST00000385299 75 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PTPRAP18433 COX6CP15-201ENST00000426313 211 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AF228730.2-201ENST00000438784 848 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 CECR9-201ENST00000453421 199 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC004801.2-202ENST00000463559 283 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC100784.1-201ENST00000522790 310 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AL161670.1-201ENST00000554348 137 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC010653.1-201ENST00000571108 881 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 COX6CP3-201ENST00000580869 223 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC069061.3-201ENST00000582254 823 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
PTPRAP18433 AC104662.1-201ENST00000604448 511 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AL450345.1-202ENST00000605741 3881 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC133104.2-201ENST00000615272 193 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AC011155.2-201ENST00000623202 216 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 AP000843.1-201ENST00000624880 701 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 Z95114.1-201ENST00000624264 14574 ntBASIC5.61□□□□□ -1.51
PTPRAP18433 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPRAP18433 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.61□□□□□ -1.51
PTPRAP18433 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
PTPRAP18433 TLK1P1-201ENST00000456760 2440 ntBASIC5.6□□□□□ -1.51
PTPRAP18433 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
PTPRAP18433 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
PTPRAP18433 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms