Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AP005901.5-201ENST00000545779 1796 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 AL645568.2-201ENST00000432815 1337 ntBASIC2.63□□□□□ -1.99
HLA-DPB1P04440 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HLA-DPB1P04440 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 RNA5SP374-201ENST00000362939 125 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 RNA5SP387-201ENST00000364226 106 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 RNU6-1181P-201ENST00000384191 106 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AL031121.1-201ENST00000406553 254 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AL449283.1-202ENST00000418249 604 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 SETP5-201ENST00000437270 562 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 VN1R10P-201ENST00000447106 875 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 NECAP1P2-201ENST00000455668 727 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 RPS3AP43-201ENST00000479743 781 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AL024509.2-201ENST00000493462 493 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 PRELID3BP6-201ENST00000503839 571 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC118942.1-201ENST00000529674 1035 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 OR4T1P-201ENST00000554933 911 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AL355812.1-201ENST00000603215 216 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC024060.1-201ENST00000607052 494 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC231759.1-201ENST00000616455 597 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC104985.3-201ENST00000623479 597 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 MIR3651-201ENST00000630427 90 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 ZNF663P-202ENST00000641770 1131 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 Z99496.1-201ENST00000469424 1477 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC244517.1-201ENST00000606030 2086 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 ASNSP3-201ENST00000451989 1306 ntBASIC2.62□□□□□ -1.99
HLA-DPB1P04440 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
HLA-DPB1P04440 AC138915.3-201ENST00000562908 1389 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC092447.7-201ENST00000422212 1621 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 SNORA70.4-201ENST00000365509 134 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 Y_RNA.408-201ENST00000383987 102 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AL450338.1-201ENST00000407987 512 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 U3.42-201ENST00000408746 214 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AL512649.1-201ENST00000428997 581 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 GTF2IP3-201ENST00000433887 494 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 GTF2IP7-202ENST00000436677 309 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 HMGB1P12-201ENST00000438594 598 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 RABEPKP1-201ENST00000440529 1026 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC091179.1-201ENST00000461606 579 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC092757.1-201ENST00000467293 467 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 RPL9P33-201ENST00000484311 566 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC096751.1-202ENST00000502691 1067 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC004062.1-201ENST00000509926 645 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 SNORA9.3-201ENST00000516383 129 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 RNU6-826P-201ENST00000516827 104 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 RN7SKP272-201ENST00000516988 232 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 FAM60DP-201ENST00000524174 632 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 ELOCP31-201ENST00000540463 467 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC073387.2-201ENST00000604797 784 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC112220.2-201ENST00000605513 533 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AL442067.2-201ENST00000614033 363 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC002076.2-201ENST00000617362 122 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC109454.4-201ENST00000623411 649 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC010872.1-201ENST00000624225 675 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AP003485.1-201ENST00000625093 753 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC099654.8-201ENST00000637757 681 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 MKKS-204ENST00000639674 192 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC091152.2-201ENST00000591628 2569 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 OR5BR1P-201ENST00000524992 1330 ntBASIC2.61□□□□□ -1.99
HLA-DPB1P04440 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms